RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 BBS5Q8N3I7 341 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 HDAC11Q96DB2 347 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TUBB2BQ9BVA1 445 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 DISC1Q9NRI5 854 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 AMFRQ9UKV5 643 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TBC1D8O95759 1140 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 STRIP1Q5VSL9 837 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TTC30AQ86WT1 665 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 GANCQ8TET4 914 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 P3H4Q92791 437 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 SLC8A2Q9UPR5 921 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PPFIA4O75335 1185 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 NTSR2O95665 410 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 MYL3P08590 195 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 HPDP32754 393 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 COPB1P53618 953 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 IL1RL1Q01638 556 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RNASELQ05823 741 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 MTMR1Q13613 665 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 STXBP2Q15833 593 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 FAM186BQ8IYM0 893 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 P2RX5Q93086 422 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 GCNAQ96QF7 691 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 TUBGCP2Q9BSJ2 902 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 F5H6K3 240 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 CASP2P42575 452 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 KLRC3Q07444 240 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 PFKFB3Q16875 520 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 ACBD5Q5T8D3 534 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RNF168Q8IYW5 571 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 LRRC43Q8N309 656 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 DHTKD1Q96HY7 919 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 TMEM206Q9H813 350 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RNF146Q9NTX7 359 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L20D6RJB6 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 BUB1BO60566 1050 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L24Q0WX57 530 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RESTQ13127 1097 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 ZNF658Q5TYW1 1059 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L6PQ6QN14 398 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RAB44Q7Z6P3 723 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 NSUN4Q96CB9 384 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 CARD6Q9BX69 1037 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 PCDHB4Q9Y5E5 795 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 SRGAP2CP0DJJ0 459 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 GARSP41250 739 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 MFAP3P55082 362 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 ALX1Q15699 326 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 CFAP221Q4G0U5 840 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 OLA1Q9NTK5 396 aaKnown RBP9.47□□□□□ -0.89
CTNND1-232ENST00000532649 GJB4Q9NTQ9 266 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RAB20Q9NX57 234 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 KRT15P19012 456 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 PHBP35232 272 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 OSTNP61366 133 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 DBN1Q16643 649 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 NLRP4Q96MN2 994 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 RCOR1Q9UKL0 485 aa9.47□□□□□ -0.89
CTNND1-232ENST00000532649 ABCB11O95342 1321 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 PYGLP06737 847 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 LMNB1P20700 586 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 PTPREP23469 700 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 TFAMQ00059 246 aaKnown RBP9.46□□□□□ -0.89
CTNND1-232ENST00000532649 GRM4Q14833 912 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 PTPROQ16827 1216 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 HADHQ16836 314 aaKnown RBP9.46□□□□□ -0.89
CTNND1-232ENST00000532649 HDXQ7Z353 690 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-232ENST00000532649 PDZD8Q8NEN9 1154 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 DESI2Q9BSY9 194 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 MIS12Q9H081 205 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 FAM49AQ9H0Q0 323 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-232ENST00000532649 DAGLAQ9Y4D2 1042 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 BZW2Q9Y6E2 419 aaKnown RBP9.46□□□□□ -0.89
CTNND1-232ENST00000532649 CSPG5O95196 566 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 AKR1B1P15121 316 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 PTK2Q05397 1052 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms