RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NR5A1Q13285 461 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 ALCAMQ13740 583 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 ALX1Q15699 326 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 THEM5Q8N1Q8 247 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 MSTO1Q9BUK6 570 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 FYB2Q5VWT5 728 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 TAOK1Q7L7X3 1001 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 TBC1D31Q96DN5 1066 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PSMB7Q99436 277 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 ZNF233A6NK53 670 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 RARBP10826 455 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 TNFAIP2Q03169 654 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 KATNAL1Q9BW62 490 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 PPANQ9NQ55 473 aaKnown RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 SH3BP5O60239 455 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 SRGNP10124 158 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 ENAHQ8N8S7 591 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 NR2F2P24468 414 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 MAPK6Q16659 721 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 CCDC89Q8N998 374 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 GCOM2Q9BZD3 368 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 PPP6R2O75170 966 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 YY1P25490 414 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 SPATA1Q5VX52 437 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 ARMCX2Q7L311 632 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 CCDC110Q8TBZ0 833 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 PSPC1Q8WXF1 523 aaKnown RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 ORC4O43929 436 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 GMNNO75496 209 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 TRIM58Q8NG06 486 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 TDRD7Q8NHU6 1098 aaKnown RBP12.3□□□□□ -0.44
PTPRK-221ENST00000532331 FAM149B1Q96BN6 582 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 PIDD1Q9HB75 910 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 FAM184BQ9ULE4 1060 aa12.3□□□□□ -0.44
PTPRK-221ENST00000532331 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 DYNC1LI2O43237 492 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 NDUFA8P51970 172 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 FAM186BQ8IYM0 893 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.29□□□□□ -0.442e-6■■■■□ 23.8
PTPRK-221ENST00000532331 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 MTMR3Q13615 1198 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 PFKFB3Q16875 520 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 LONRF2Q1L5Z9 754 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 SWSAP1Q6NVH7 229 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 SCYL3Q8IZE3 742 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 MICALL1Q8N3F8 863 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 LRRC4Q9HBW1 653 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 A6NNZ2 444 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 RNF8O76064 485 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.449e-7■■□□□ 13.8
PTPRK-221ENST00000532331 PEX3P56589 373 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 BFSP1Q12934 665 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 TUBB8Q3ZCM7 444 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 RPGRIP1Q96KN7 1286 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 MTRQ99707 1265 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 RAB17Q9H0T7 212 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 RAB20Q9NX57 234 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 SPDYE16A6NNV3 312 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 DPYSL4O14531 572 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 NSFP46459 744 aaKnown RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 KIF23Q02241 960 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-221ENST00000532331 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
PTPRK-221ENST00000532331 ABCB4P21439 1286 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 ZNF827Q17R98 1081 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 CASC4Q6P4E1 433 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 THNSL1Q8IYQ7 743 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 AFAP1L2Q8N4X5 818 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 SAR1BQ9Y6B6 198 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 GIPC1O14908 333 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms