RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SHISA4	Q96DD7	197 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	ZBED3	Q96IU2	234 aa	Predicted RBP	7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	KRTAP4-8	Q9BYQ9	185 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	CORIN	Q9Y5Q5	1042 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	CAPN6	Q9Y6Q1	641 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	DLG5	Q8TDM6	1919 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867		A0A0C4DFX4	3053 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	WTIP	A6NIX2	430 aa	Predicted RBP	7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	HTR3B	O95264	441 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	HSPA5	P11021	654 aa	Known RBP	7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	ITGB5	P18084	799 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	SLC4A8	Q2Y0W8	1093 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	SLC9C1	Q4G0N8	1177 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	SLC23A3	Q6PIS1	610 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	THAP5	Q7Z6K1	395 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	SLFN12	Q8IYM2	578 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	TMEM87A	Q8NBN3	555 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	PIWIL2	Q8TC59	973 aa	Known RBP	7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	WNK4	Q96J92	1243 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	PTPN18	Q99952	460 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	REV1	Q9UBZ9	1251 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	TRMT112	Q9UI30	125 aa	Known RBP	7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	TMA7	Q9Y2S6	64 aa	Known RBP	7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	PTCH2	Q9Y6C5	1203 aa		7.33	□□□□□ -1.24
PUM1-222	ENST00000531867	COL1A1	P02452	1464 aa	Predicted RBP	7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	RPS8	P62241	208 aa	Known RBP	7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	ARHGEF6	Q15052	776 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	OTUD7B	Q6GQQ9	843 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	NOP9	Q86U38	636 aa	Known RBP	7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	CDH24	Q86UP0	819 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	RIN3	Q8TB24	985 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	THUMPD2	Q9BTF0	503 aa	Known RBP	7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	RC3H2	Q9HBD1	1191 aa	Known RBP	7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	COPRS	Q9NQ92	184 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	LMCD1	Q9NZU5	365 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	STXBP5L	Q9Y2K9	1186 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	SSC5D	A1L4H1	1573 aa		7.32	□□□□□ -1.24
PUM1-222	ENST00000531867	PRR33	A8MZF0	331 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	CBX7	O95931	251 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	CD96	P40200	585 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	PROSER3	Q2NL68	480 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	DACT2	Q5SW24	774 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	FBXL19	Q6PCT2	694 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	NOL8	Q76FK4	1167 aa	Known RBP	7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	DPH6	Q7L8W6	267 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	DNAJB8	Q8NHS0	232 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	DPF3	Q92784	378 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	ASIC4	Q96FT7	647 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	CLMN	Q96JQ2	1002 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	METTL5	Q9NRN9	209 aa	Known RBP	7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	SEMA3G	Q9NS98	782 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	CEP131	Q9UPN4	1083 aa		7.31	□□□□□ -1.24
PUM1-222	ENST00000531867	ECM29	Q5VYK3	1845 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	SCAMP3	O14828	347 aa	Known RBP	7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	GREM1	O60565	184 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	UFL1	O94874	794 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	RNASE1	P07998	156 aa	Known RBP	7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	BMP8B	P34820	402 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	ZNF76	P36508	570 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	ZP2	Q05996	745 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	CC2D1B	Q5T0F9	858 aa	Known RBP	7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	CDKAL1	Q5VV42	579 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	GIMAP6	Q6P9H5	292 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	COPS6	Q7L5N1	327 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	HSPA12B	Q96MM6	686 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	ISCA1	Q9BUE6	129 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	HTATIP2	Q9BUP3	242 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	MBNL3	Q9NUK0	354 aa	Known RBP	7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	KLHL3	Q9UH77	587 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	FZD1	Q9UP38	647 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	NR2E3	Q9Y5X4	410 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	ST14	Q9Y5Y6	855 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	LAMA3	Q16787	3333 aa		7.3	□□□□□ -1.24
PUM1-222	ENST00000531867	MYO3B	Q8WXR4	1341 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	ZSWIM8	A7E2V4	1837 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867		H3BS24	57 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	TLR3	O15455	904 aa	Known RBP	7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	USP2	O75604	605 aa	Predicted RBP	7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	TXK	P42681	527 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	GJA8	P48165	433 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	TNNI2	P48788	182 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	PRMT2	P55345	433 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	PRKG1	Q13976	671 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	STRIP1	Q5VSL9	837 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	ATG4D	Q86TL0	474 aa	Predicted RBP	7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	FBXO27	Q8NI29	283 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	SH3TC2	Q8TF17	1288 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	RNF141	Q8WVD5	230 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	CCDC74B	Q96LY2	380 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	TANGO6	Q9C0B7	1094 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	DEFB129	Q9H1M3	183 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	MTMR10	Q9NXD2	777 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	ADAMTS1	Q9UHI8	967 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	ADAMTS6	Q9UKP5	1117 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	KCNH3	Q9ULD8	1083 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	RNF114	Q9Y508	228 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	PPP2R3B	Q9Y5P8	575 aa		7.29	□□□□□ -1.24
PUM1-222	ENST00000531867	OTOF	Q9HC10	1997 aa		7.28	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms