RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 WASF3Q9UPY6 502 aa6.22□□□□□ -1.41
USP47-211ENST00000531513 H7BY64 318 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 PPP1R12AO14974 1030 aaPredicted RBP6.21□□□□□ -1.42
USP47-211ENST00000531513 DNAJC6O75061 913 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 CDC45O75419 566 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 TADA3O75528 432 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 LRG1P02750 347 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 CAPNS1P04632 268 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 LCP1P13796 627 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 HOXC12P31275 282 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 LTBRP36941 435 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 HMGA2P52926 109 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 PPP2CBP62714 309 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 PPP2CAP67775 309 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 TESK1Q15569 626 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 SF1Q15637 639 aaKnown RBP6.21□□□□□ -1.42
USP47-211ENST00000531513 FXNQ16595 210 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 LARP1BQ659C4 914 aaKnown RBP6.21□□□□□ -1.42
USP47-211ENST00000531513 ZNF585AQ6P3V2 769 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 TMC5Q6UXY8 1006 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 ARHGEF18Q6ZSZ5 1173 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 APPBP2Q92624 585 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 WRNIP1Q96S55 665 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 TMEM209Q96SK2 561 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 PTPN18Q99952 460 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 VPS11Q9H270 941 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 SLKQ9H2G2 1235 aaPredicted RBP6.21□□□□□ -1.42
USP47-211ENST00000531513 KANSL2Q9H9L4 492 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 SPC25Q9HBM1 224 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 PRKAB1Q9Y478 270 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 PCDHA2Q9Y5H9 948 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
USP47-211ENST00000531513 SUSD5O60279 629 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 ACVRL1P37023 503 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 KCNJ6P48051 423 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 SELENOPP49908 381 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 LSAMPQ13449 338 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 SV2CQ496J9 727 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 HOMER1Q86YM7 354 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 ZFPM1Q8IX07 1006 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 KLHL36Q8N4N3 616 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 CHAMP1Q96JM3 812 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 ZNF747Q9BV97 191 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 MEGF9Q9H1U4 602 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 PCDH12Q9NPG4 1184 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 JADE2Q9NQC1 790 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 CLDND1Q9NY35 253 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 MYOTQ9UBF9 498 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 RBPJLQ9UBG7 517 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 FTSJ1Q9UET6 329 aa6.2□□□□□ -1.42
USP47-211ENST00000531513 ESYT3A0FGR9 886 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 CYR61O00622 381 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 CYP7B1O75881 506 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 CPP00450 1065 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 GFRA1P56159 465 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 R3HDM1Q15032 1099 aaKnown RBP6.19□□□□□ -1.42
USP47-211ENST00000531513 DENND5AQ6IQ26 1287 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 TRMT10BQ6PF06 316 aaKnown RBP6.19□□□□□ -1.42
USP47-211ENST00000531513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP47-211ENST00000531513 WWC2-AS2Q96NR7 200 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 MRIQ9BWK5 157 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 DEF6Q9H4E7 631 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 EPB41L1Q9H4G0 881 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 LRP2BPQ9P2M1 347 aa6.19□□□□□ -1.42
USP47-211ENST00000531513 PATE3B3GLJ2 98 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 MARCH6O60337 910 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 DGKIO75912 1065 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 DDAH1O94760 285 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 COL6A1P12109 1028 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 NFATC3Q12968 1075 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 SLFN13Q68D06 897 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 KIAA0907Q7Z7F0 614 aaPredicted RBP6.18□□□□□ -1.42
USP47-211ENST00000531513 TMEM145Q8NBT3 493 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 C1orf159Q96HA4 380 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 METTL14Q9HCE5 456 aaKnown RBP6.18□□□□□ -1.42
USP47-211ENST00000531513 TMEM260Q9NX78 707 aa6.18□□□□□ -1.42
USP47-211ENST00000531513 OVOL3O00110 214 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 B4GALT4O60513 344 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 FZD7O75084 574 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 GJB6O95452 261 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 GYS2P54840 703 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 SQSTM1Q13501 440 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 C16orf86Q6ZW13 317 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 JMYQ8N9B5 988 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 PHOSPHO1Q8TCT1 267 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 NUDT11Q96G61 164 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 CCDC140Q96MF4 163 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 EPN3Q9H201 632 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 BARX1Q9HBU1 254 aaPredicted RBP6.17□□□□□ -1.42
USP47-211ENST00000531513 TCAF1Q9Y4C2 921 aa6.17□□□□□ -1.42
USP47-211ENST00000531513 MUSKO15146 869 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 AMHP03971 560 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 SLC10A6Q3KNW5 377 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 MTERF2Q49AM1 385 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 C2orf27AQ580R0 203 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 SPDYAQ5MJ70 313 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 PHF19Q5T6S3 580 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 EEPD1Q7L9B9 569 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 PROSER1Q86XN7 944 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms