RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GPR20Q99678 358 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 LMAN2LQ9H0V9 348 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 KCNH6Q9H252 994 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 CNNM2Q9H8M5 875 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 RWDD3Q9Y3V2 267 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 TELO2Q9Y4R8 837 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 SPATA31C2B4DYI2 1134 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
NEDD8-206ENST00000531430 CAND2O75155 1236 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 MRPS9P82933 396 aaKnown RBP10.67□□□□□ -0.7
NEDD8-206ENST00000531430 TRDNQ13061 729 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 SMAD2Q15796 467 aaKnown RBP10.67□□□□□ -0.7
NEDD8-206ENST00000531430 IER5LQ5T953 404 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 METTL7BQ6UX53 244 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 RUFY4Q6ZNE9 571 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 CYB5R4Q7L1T6 521 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
NEDD8-206ENST00000531430 SAMD3Q8N6K7 520 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 LMBR1Q8WVP7 490 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 EDAQ92838 391 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 GLG1Q92896 1179 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 PPP2R3CQ969Q6 453 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 RPGRIP1Q96KN7 1286 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 BAZ2BQ9UIF8 2168 aaKnown RBP10.67□□□□□ -0.7
NEDD8-206ENST00000531430 KAT6AQ92794 2004 aa10.67□□□□□ -0.7
NEDD8-206ENST00000531430 ADGRA3Q8IWK6 1321 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 NRCAMQ92823 1304 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 ERICH2A1L162 156 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-206ENST00000531430 TMEM221A6NGB7 291 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 M0R296 226 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 FIBPO43427 364 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 TMEM62Q0P6H9 643 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 PPFIA1Q13136 1202 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 ADAM15Q13444 863 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 SMAD4Q13485 552 aaKnown RBP10.66□□□□□ -0.7
NEDD8-206ENST00000531430 LPIN1Q14693 890 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 CTC1Q2NKJ3 1217 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 HERC4Q5GLZ8 1057 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-206ENST00000531430 FAM26DQ5JW98 314 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 TICAM2Q86XR7 235 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 CUL5Q93034 780 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 FAM49AQ9H0Q0 323 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-206ENST00000531430 LRFN2Q9ULH4 789 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 PLAGL2Q9UPG8 496 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 CDY2AQ9Y6F7 541 aa10.66□□□□□ -0.7
NEDD8-206ENST00000531430 WDFY4Q6ZS81 3184 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 C5orf42Q9H799 3197 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 C5orf67F2Z3F1 127 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 HIP1O00291 1037 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 PER2O15055 1255 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 TBX10O75333 385 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 CD52P31358 61 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 ICAM3P32942 547 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 TCF7P36402 384 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-206ENST00000531430 NRIP1P48552 1158 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 NT5C2P49902 561 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.7
NEDD8-206ENST00000531430 USP17L6PQ6QN14 398 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 ADGRD2Q7Z7M1 963 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 KLHL23Q8NBE8 558 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 POF1BQ8WVV4 589 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 ZBTB10Q96DT7 871 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 MTMR8Q96EF0 704 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
NEDD8-206ENST00000531430 MRPL42Q9Y6G3 142 aaKnown RBP10.65□□□□□ -0.7
NEDD8-206ENST00000531430 ATP9AO75110 1047 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 STAM2O75886 525 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 DGKIO75912 1065 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 MMP1P03956 469 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 DNAJB1P25685 340 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 HOXC8P31273 242 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 PTPN5P54829 565 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 GHRHRQ02643 423 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 SEMA3FQ13275 785 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 GRM4Q14833 912 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 COL19A1Q14993 1142 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 WTAPQ15007 396 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 SEC23AQ15436 765 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 GRIK4Q16099 956 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 TAF2Q6P1X5 1199 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 ZBTB33Q86T24 672 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 GIMAP8Q8ND71 665 aaPredicted RBP10.64□□□□□ -0.71
NEDD8-206ENST00000531430 PRSS33Q8NF86 280 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 SPPL3Q8TCT6 385 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 PLVAPQ9BX97 442 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 RWDD1Q9H446 243 aaPredicted RBP10.64□□□□□ -0.71
NEDD8-206ENST00000531430 RIOX1Q9H6W3 641 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 TLE6Q9H808 572 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 FAM86C1Q9NVL1 165 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 TUBE1Q9UJT0 475 aa10.64□□□□□ -0.71
NEDD8-206ENST00000531430 BARX2Q9UMQ3 279 aaPredicted RBP10.64□□□□□ -0.71
NEDD8-206ENST00000531430 GINS2Q9Y248 185 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms