RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ERMNQ8TAM6 284 aa21.4■■□□□ 1.02
SMPD1-205ENST00000531303 FARP2O94887 1054 aaPredicted RBP21.39■■□□□ 1.02
SMPD1-205ENST00000531303 SYKP43405 635 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 LBX1P52954 281 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 PRMT2P55345 433 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 ACTR2P61160 394 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 CYP4A11Q02928 519 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 CACNB2Q08289 660 aaPredicted RBP21.39■■□□□ 1.02
SMPD1-205ENST00000531303 B3GNT9Q6UX72 402 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 LENG1Q96BZ8 264 aaPredicted RBP21.39■■□□□ 1.02
SMPD1-205ENST00000531303 EIF2AK1Q9BQI3 630 aaKnown RBP21.39■■□□□ 1.02
SMPD1-205ENST00000531303 DISC1Q9NRI5 854 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 RGL1Q9NZL6 768 aa21.39■■□□□ 1.02
SMPD1-205ENST00000531303 A0A087X0B3 334 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 WDR64B1ANS9 1081 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 POLR2DO15514 142 aaKnown RBP21.39■■□□□ 1.01
SMPD1-205ENST00000531303 ADCY6O43306 1168 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 NR1I2O75469 434 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 HMGCRP04035 888 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 PRKAR2AP13861 404 aaKnown RBP21.39■■□□□ 1.01
SMPD1-205ENST00000531303 ZNF746Q6NUN9 644 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-205ENST00000531303 METTL7BQ6UX53 244 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 DYDC2Q96IM9 177 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 CDK5RAP3Q96JB5 506 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 SPATA33Q96N06 139 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 CCSER1Q9C0I3 900 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 FAM184BQ9ULE4 1060 aa21.39■■□□□ 1.01
SMPD1-205ENST00000531303 MED24O75448 989 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 GH1P01241 217 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 CYBAP13498 195 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 JAK3P52333 1124 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 CTTNQ14247 550 aaKnown RBP21.38■■□□□ 1.01
SMPD1-205ENST00000531303 EPHA7Q15375 998 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 DUSP28Q4G0W2 176 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 TPH2Q8IWU9 490 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 BANK1Q8NDB2 785 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 DHX58Q96C10 678 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 CALML4Q96GE6 196 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 CCDC39Q9UFE4 941 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 HPSEQ9Y251 543 aa21.38■■□□□ 1.01
SMPD1-205ENST00000531303 WDR81Q562E7 1941 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 A0A087WWV3 80 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 POTEB3A0JP26 581 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 NOP56O00567 594 aaKnown RBP21.37■■□□□ 1.01
SMPD1-205ENST00000531303 TRAK2O60296 914 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 MBD3O95983 291 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 SFNP31947 248 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 CTCFP49711 727 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-205ENST00000531303 ARHGAP1Q07960 439 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 ECM1Q16610 540 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 RRAGBQ5VZM2 374 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 POTEBQ6S5H4 581 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 FMR1NBQ8N0W7 255 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-205ENST00000531303 SLAIN1Q8ND83 568 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 OR6J1Q8NGC5 347 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 PXYLP1Q8TE99 480 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 PNMA5Q96PV4 448 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 DACT1Q9NYF0 836 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 PCDHA10Q9Y5I2 948 aa21.37■■□□□ 1.01
SMPD1-205ENST00000531303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-205ENST00000531303 FAM237AA0A1B0GTK4 181 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 DYNC1LI2O43237 492 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-205ENST00000531303 ZNF202O95125 648 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 PLCG1P19174 1290 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 CCND3P30281 292 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-205ENST00000531303 GRK4P32298 578 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 GRB10Q13322 594 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 SNW1Q13573 536 aaKnown RBP21.36■■□□□ 1.01
SMPD1-205ENST00000531303 LAMC2Q13753 1193 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 HSDL1Q3SXM5 330 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 HAUS3Q68CZ6 603 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 MIS18BP1Q6P0N0 1132 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 CATSPER3Q86XQ3 398 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 SMAP1Q8IYB5 467 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-205ENST00000531303 ENGASEQ8NFI3 743 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 NRBP1Q9UHY1 535 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 KIAA1024Q9UPX6 916 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 PTPN22Q9Y2R2 807 aa21.36■■□□□ 1.01
SMPD1-205ENST00000531303 MYH9P35579 1960 aaKnown RBP21.36■■□□□ 1.01
SMPD1-205ENST00000531303 GSTTP1A0A1W2PQM5 241 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 POTEFA5A3E0 1075 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 BACH1O14867 736 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 NKRFO15226 690 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMPD1-205ENST00000531303 INHAP05111 366 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 PSAPP07602 524 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 SPATA31C1P0DKV0 1188 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 AKR1A1P14550 325 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 STAT6P42226 847 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 SWSAP1Q6NVH7 229 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 POTEGQ6S5H5 508 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 TRMT1LQ7Z2T5 733 aaKnown RBP21.35■■□□□ 1.01
SMPD1-205ENST00000531303 SH3TC2Q8TF17 1288 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 AFG1LQ8WV93 481 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 GABBR1Q9UBS5 961 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 SERTAD1Q9UHV2 236 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 STK24Q9Y6E0 443 aa21.35■■□□□ 1.01
SMPD1-205ENST00000531303 KINO60870 393 aaKnown RBP21.34■■□□□ 1.01
SMPD1-205ENST00000531303 SLITRK3O94933 977 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 SUPT20HL2P0C7V6 817 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms