RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 DCDC2CA8MYV0 355 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 MAFGO15525 162 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 CTDNEP1O95476 244 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 ZSCAN22P10073 491 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 FOSL2P15408 326 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SYT1P21579 422 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 TXLNAP40222 546 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 USP11P51784 963 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 FOSBP53539 338 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PSMC6P62333 389 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 RPS6P62753 249 aaKnown RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 KRT85P78386 507 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 GHRHRQ02643 423 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 TNFAIP2Q03169 654 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 BAATQ14032 418 aaPredicted RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SF3A1Q15459 793 aaKnown RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 STXBP2Q15833 593 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PKN1Q16512 942 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 GNASQ5JWF2 1037 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 MOXD1Q6UVY6 613 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SLC30A10Q6XR72 485 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PIK3AP1Q6ZUJ8 805 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SPRED2Q7Z698 418 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 NEK8Q86SG6 692 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 TLK2Q86UE8 772 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SLFN12Q8IYM2 578 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PCSK9Q8NBP7 692 aaKnown RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 TNPO1Q92973 898 aaKnown RBP5.42□□□□□ -1.54
SSBP3-213ENST00000530618 TIFAQ96CG3 184 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 GLT1D1Q96MS3 346 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PPP1R12CQ9BZL4 782 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 TRPV6Q9H1D0 765 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 CPVLQ9H3G5 476 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SPC25Q9HBM1 224 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 IL23AQ9NPF7 189 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 SCUBE2Q9NQ36 999 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PCDHA6Q9UN73 950 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 PCDHA8Q9Y5H6 950 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 MROH7Q68CQ1 1323 aa5.42□□□□□ -1.54
SSBP3-213ENST00000530618 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 EPOPA6NHQ4 379 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 NKRFO15226 690 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ZEB2O60315 1214 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 NEMFO60524 1076 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 CCNT1O60563 726 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 DKC1O60832 514 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PPFIA3O75145 1194 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 EIF3JO75822 258 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ARIH2O95376 493 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 F13A1P00488 732 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 TGFB3P10600 412 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 MYOGP15173 224 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 U2AF2P26368 475 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 SREBF1P36956 1147 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ALDH5A1P51649 535 aaPredicted RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ARHGAP4P98171 946 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 GUCY1B3Q02153 619 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PPIGQ13427 754 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ITGA7Q13683 1181 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 COL9A3Q14050 684 aaPredicted RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 TTLL4Q14679 1199 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 FSCN1Q16658 493 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 SLC35G1Q2M3R5 365 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 TCTN1Q2MV58 587 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 LETM2Q2VYF4 491 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 DUSP28Q4G0W2 176 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 JAKMIP3Q5VZ66 844 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PCNX4Q63HM2 1172 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PSRC1Q6PGN9 363 aaPredicted RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 TRAF7Q6Q0C0 670 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 NIPA1Q7RTP0 329 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ERMNQ8TAM6 284 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 KCNG4Q8TDN1 519 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 SYTL5Q8TDW5 730 aaPredicted RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 TBCKQ8TEA7 893 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PPP1R13LQ8WUF5 828 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 SCLYQ96I15 445 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 SDF4Q9BRK5 362 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PYM1Q9BRP8 204 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 ANO3Q9BYT9 981 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 NKX2-4Q9H2Z4 354 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PRDM12Q9H4Q4 367 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 VTA1Q9NP79 307 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 PXMP2Q9NR77 195 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 TRMT13Q9NUP7 481 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 COL20A1Q9P218 1284 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 DDX25Q9UHL0 483 aaKnown RBP5.41□□□□□ -1.54
SSBP3-213ENST00000530618 KCNJ14Q9UNX9 436 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 Q9Y3F1 56 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 KAT6AQ92794 2004 aa5.41□□□□□ -1.54
SSBP3-213ENST00000530618 A6NJR5 290 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 BTBD18B2RXH4 712 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 MEIS2O14770 477 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 OPLAHO14841 1288 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 TBX3O15119 743 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 DYNC1LI2O43237 492 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 FIBPO43427 364 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms