RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 IL9P15248 144 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-219ENST00000530495 ANTXR2P58335 489 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 TIGD5Q53EQ6 642 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
CAPN1-219ENST00000530495 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 RPAINQ86UA6 219 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 GIMAP8Q8ND71 665 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-219ENST00000530495 SMARCC2Q8TAQ2 1214 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 CUL5Q93034 780 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
CAPN1-219ENST00000530495 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 IFIH1Q9BYX4 1025 aaKnown RBP17.21■□□□□ 0.35
CAPN1-219ENST00000530495 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
CAPN1-219ENST00000530495 NLRX1Q86UT6 975 aa17.2■□□□□ 0.34
CAPN1-219ENST00000530495 PABPC5Q96DU9 382 aaKnown RBP17.2■□□□□ 0.34
CAPN1-219ENST00000530495 IL17RAQ96F46 866 aa17.2■□□□□ 0.34
CAPN1-219ENST00000530495 EHMT1Q9H9B1 1298 aa17.2■□□□□ 0.34
CAPN1-219ENST00000530495 FAM86C2PA6NEL3 165 aa17.19■□□□□ 0.34
CAPN1-219ENST00000530495 C5orf67F2Z3F1 127 aa17.19■□□□□ 0.34
CAPN1-219ENST00000530495 TCEAL5Q5H9L2 206 aa17.19■□□□□ 0.34
CAPN1-219ENST00000530495 TAF2Q6P1X5 1199 aa17.19■□□□□ 0.34
CAPN1-219ENST00000530495 MB21D2Q8IYB1 491 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-219ENST00000530495 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-219ENST00000530495 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
CAPN1-219ENST00000530495 LZTS2Q9BRK4 669 aa17.19■□□□□ 0.34
CAPN1-219ENST00000530495 NSUN3Q9H649 340 aaKnown RBP17.19■□□□□ 0.34
CAPN1-219ENST00000530495 SGSM2O43147 1006 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 ATP9AO75110 1047 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 DDAH1O94760 285 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 RB1P06400 928 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 KIF5BP33176 963 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 TCF7P36402 384 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-219ENST00000530495 SP4Q02446 784 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 ZNF654Q8IZM8 581 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 FIBCD1Q8N539 461 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 SEPT1Q8WYJ6 367 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 GPRASP2Q96D09 838 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 MTA3Q9BTC8 594 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 LY9Q9HBG7 655 aa17.18■□□□□ 0.34
CAPN1-219ENST00000530495 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
CAPN1-219ENST00000530495 GSTTP1A0A1W2PQM5 241 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 PRR33A8MZF0 331 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 H3BQ06 376 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-219ENST00000530495 ENPP3O14638 875 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 NCK2O43639 380 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 LINC00271P0C7V0 271 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 ALADP13716 330 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 KCNA2P16389 499 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 SSTR3P32745 418 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-219ENST00000530495 BMPR1AP36894 532 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 GNAQP50148 359 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 MGAT3Q09327 533 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 RUFY4Q6ZNE9 571 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 TMTC2Q8N394 836 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 CDHR1Q96JP9 859 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 ERAP1Q9NZ08 941 aa17.17■□□□□ 0.34
CAPN1-219ENST00000530495 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
CAPN1-219ENST00000530495 MBLAC1A4D2B0 266 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-219ENST00000530495 ITGB5P18084 799 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 LPIN1Q14693 890 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 MARCH8Q5T0T0 291 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 SRBD1Q8N5C6 995 aaKnown RBP17.16■□□□□ 0.34
CAPN1-219ENST00000530495 LMAN2LQ9H0V9 348 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 PRKAG3Q9UGI9 489 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
CAPN1-219ENST00000530495 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 POTEB3A0JP26 581 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 MAFGO15525 162 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 GHRP10912 638 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 CTNNB1P35222 781 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 LTBRP36941 435 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 GRIK4Q16099 956 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 CTC1Q2NKJ3 1217 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 POTEBQ6S5H4 581 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 CLP1Q92989 425 aaKnown RBP17.15■□□□□ 0.34
CAPN1-219ENST00000530495 ZNF689Q96CS4 500 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-219ENST00000530495 C11orf84Q9BUA3 381 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-219ENST00000530495 SMARCAD1Q9H4L7 1026 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 RC3H2Q9HBD1 1191 aaKnown RBP17.15■□□□□ 0.34
CAPN1-219ENST00000530495 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 RWDD3Q9Y3V2 267 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
CAPN1-219ENST00000530495 UBIAD1Q9Y5Z9 338 aa17.15■□□□□ 0.34
CAPN1-219ENST00000530495 TTC3P53804 2025 aa17.14■□□□□ 0.34
CAPN1-219ENST00000530495 C19orf67A6NJJ6 358 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 GRM6O15303 877 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 MTMR1Q13613 665 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 FBXO47Q5MNV8 452 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 EP400NLQ6ZTU2 488 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 DNAJB3Q8WWF6 145 aa17.14■□□□□ 0.33
CAPN1-219ENST00000530495 GLG1Q92896 1179 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms