RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TCF7P36402 384 aaPredicted RBP23.95■■□□□ 1.42
SMPD1-204ENST00000530395 NAPAP54920 295 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 ARHGAP4P98171 946 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 EXOSC10Q01780 885 aaKnown RBP23.95■■□□□ 1.42
SMPD1-204ENST00000530395 TSGA10IPQ3SY00 556 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 PPP1R18Q6NYC8 613 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 TEX2Q8IWB9 1127 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 SEPT8Q92599 483 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 UBIAD1Q9Y5Z9 338 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 SIP14410 1827 aa23.95■■□□□ 1.42
SMPD1-204ENST00000530395 HMGB1P09429 215 aaKnown RBP23.94■■□□□ 1.42
SMPD1-204ENST00000530395 CTSHP09668 335 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 PLEKHG4Q58EX7 1191 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 WWC2Q6AWC2 1192 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 FAM117BQ6P1L5 589 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 LMBR1Q8WVP7 490 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 SEPT1Q8WYJ6 367 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 TCEANC2Q96MN5 208 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 JADE2Q9NQC1 790 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 TELO2Q9Y4R8 837 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 NCOR1O75376 2440 aa23.94■■□□□ 1.42
SMPD1-204ENST00000530395 GOLGA8AA7E2F4 631 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 GOLGA8BA8MQT2 603 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 hCG_1984214I3L0E3 225 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 ATP9AO75110 1047 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 GRB10Q13322 594 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 ZNF713Q8N859 430 aaPredicted RBP23.93■■□□□ 1.42
SMPD1-204ENST00000530395 ERAP1Q9NZ08 941 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 PKD2L1Q9P0L9 805 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 BDP1A6H8Y1 2624 aa23.93■■□□□ 1.42
SMPD1-204ENST00000530395 KLF18A0A0U1RQI7 1052 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 FGD1P98174 961 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 AAK1Q2M2I8 961 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 ADCK5Q3MIX3 580 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMPD1-204ENST00000530395 RASEFQ8IZ41 740 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 MYOCDQ8IZQ8 938 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 GLG1Q92896 1179 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 TGS1Q96RS0 853 aaKnown RBP23.92■■□□□ 1.42
SMPD1-204ENST00000530395 RIC8AQ9NPQ8 531 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 BRPF3Q9ULD4 1205 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 INSL6Q9Y581 213 aa23.92■■□□□ 1.42
SMPD1-204ENST00000530395 FOSP01100 380 aaPredicted RBP23.91■■□□□ 1.42
SMPD1-204ENST00000530395 ADCY7P51828 1080 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 RCAN1P53805 252 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 ADAM17P78536 824 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 PPFIA1Q13136 1202 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 TAF2Q6P1X5 1199 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 APBB2Q92870 758 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 GLT8D2Q9H1C3 349 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 SMARCAD1Q9H4L7 1026 aa23.91■■□□□ 1.42
SMPD1-204ENST00000530395 JPH1Q9HDC5 661 aaPredicted RBP23.91■■□□□ 1.42
SMPD1-204ENST00000530395 GSTTP1A0A1W2PQM5 241 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 LINC01553A4QN01 128 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 TNFRSF10AO00220 468 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 ERVK-21P61565 698 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 MKRN4PQ13434 485 aaPredicted RBP23.9■■□□□ 1.42
SMPD1-204ENST00000530395 SPRED2Q7Z698 418 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 ADAMTS19Q8TE59 1207 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 MTUS1Q9ULD2 1270 aa23.9■■□□□ 1.42
SMPD1-204ENST00000530395 NAP1L2Q9ULW6 460 aaPredicted RBP23.9■■□□□ 1.42
SMPD1-204ENST00000530395 V9GY48 417 aaPredicted RBP23.9■■□□□ 1.42
SMPD1-204ENST00000530395 MARK3P27448 753 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 FUT2Q10981 343 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 FAM26DQ5JW98 314 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 KRT40Q6A162 431 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 RSPH3Q86UC2 560 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 GDPD5Q8WTR4 605 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 MXRA8Q9BRK3 442 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 SDF4Q9BRK5 362 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 KCNH7Q9NS40 1196 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 LMCD1Q9NZU5 365 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 TUBE1Q9UJT0 475 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 COG5Q9UP83 839 aa23.89■■□□□ 1.41
SMPD1-204ENST00000530395 STXBP3O00186 592 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 LPXNO60711 386 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 AP3B2Q13367 1082 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 GRIK4Q16099 956 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 TYW1BQ6NUM6 668 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 RPAINQ86UA6 219 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 UHRF1Q96T88 793 aaPredicted RBP23.88■■□□□ 1.41
SMPD1-204ENST00000530395 ANO3Q9BYT9 981 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 IFIH1Q9BYX4 1025 aaKnown RBP23.88■■□□□ 1.41
SMPD1-204ENST00000530395 AZI2Q9H6S1 392 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 BARHL2Q9NY43 387 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 SLC9A2Q9UBY0 812 aa23.88■■□□□ 1.41
SMPD1-204ENST00000530395 CCDC196A0A1B0GTZ2 297 aa23.87■■□□□ 1.41
SMPD1-204ENST00000530395 SMCO2A6NFE2 343 aa23.87■■□□□ 1.41
SMPD1-204ENST00000530395 METAP2P50579 478 aaKnown RBP eCLIP23.87■■□□□ 1.41
SMPD1-204ENST00000530395 HTRA4P83105 476 aaPredicted RBP23.87■■□□□ 1.41
SMPD1-204ENST00000530395 TNPO1Q92973 898 aaKnown RBP23.87■■□□□ 1.41
SMPD1-204ENST00000530395 TCF20Q9UGU0 1960 aaKnown RBP23.87■■□□□ 1.41
SMPD1-204ENST00000530395 NFASCO94856 1347 aa23.86■■□□□ 1.41
SMPD1-204ENST00000530395 RPLP2P05387 115 aaKnown RBP23.86■■□□□ 1.41
SMPD1-204ENST00000530395 TFF2Q03403 129 aa23.86■■□□□ 1.41
SMPD1-204ENST00000530395 CEP55Q53EZ4 464 aa23.86■■□□□ 1.41
SMPD1-204ENST00000530395 RUFY4Q6ZNE9 571 aa23.86■■□□□ 1.41
SMPD1-204ENST00000530395 PGBD1Q96JS3 809 aa23.86■■□□□ 1.41
SMPD1-204ENST00000530395 YME1L1Q96TA2 773 aa23.86■■□□□ 1.41
SMPD1-204ENST00000530395 SUGCTQ9HAC7 445 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms