RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 TRAV20A0A0B4J274 112 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 E9PSI1 815 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 WNT9AO14904 365 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 MAFGO15525 162 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 PRODHO43272 600 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 ADCY3O60266 1144 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 CYP7B1O75881 506 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 EPHA5P54756 1037 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 FAM193AP78312 1265 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 RASGRF1Q13972 1273 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 MCTP2Q6DN12 878 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 KCNT2Q6UVM3 1135 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 MTERF4Q7Z6M4 381 aaKnown RBP5.06□□□□□ -1.6
CTR9-205ENST00000529898 FAM124AQ86V42 546 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 PIP4K2CQ8TBX8 421 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 LCORQ96JN0 433 aaPredicted RBP5.06□□□□□ -1.6
CTR9-205ENST00000529898 CLIC6Q96NY7 704 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 WRNIP1Q96S55 665 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 DNAJC2Q99543 621 aaKnown RBP5.06□□□□□ -1.6
CTR9-205ENST00000529898 YIPF4Q9BSR8 244 aa5.06□□□□□ -1.6
CTR9-205ENST00000529898 TOP2AP11388 1531 aaKnown RBP5.06□□□□□ -1.6
CTR9-205ENST00000529898 SMARCA2P51531 1590 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 ABCC8Q09428 1581 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 CHGBP05060 677 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 COL6A1P12109 1028 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 MAGEA10P43363 369 aaPredicted RBP5.05□□□□□ -1.6
CTR9-205ENST00000529898 MLLT6P55198 1093 aaPredicted RBP5.05□□□□□ -1.6
CTR9-205ENST00000529898 BORAQ6PGQ7 559 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 DPH6Q7L8W6 267 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 SCUBE1Q8IWY4 988 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 IFNL3Q8IZI9 196 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 DTX3Q8N9I9 347 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 BORCS6Q96GS4 357 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 SAMD11Q96NU1 681 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 SPATA9Q9BWV2 254 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 C1QTNF3Q9BXJ4 246 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 INVSQ9Y283 1065 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 SMARCA4P51532 1647 aa5.05□□□□□ -1.6
CTR9-205ENST00000529898 GOLGA6L3A6NEY3 463 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 PDPK1O15530 556 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 B4GALT3O60512 393 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 STK10O94804 968 aaKnown RBP5.04□□□□□ -1.6
CTR9-205ENST00000529898 KIF20AO95235 890 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 TPM2P07951 284 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 FAHP16930 419 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 GRK2P25098 689 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 GRK3P35626 688 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 TNNT2P45379 298 aaPredicted RBP5.04□□□□□ -1.6
CTR9-205ENST00000529898 IRX3P78415 501 aaPredicted RBP5.04□□□□□ -1.6
CTR9-205ENST00000529898 SLC20A2Q08357 652 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 SPIRE1Q08AE8 756 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 IFRD2Q12894 506 aaPredicted RBP5.04□□□□□ -1.6
CTR9-205ENST00000529898 SURF1Q15526 300 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 NAALADL2Q58DX5 795 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 YOD1Q5VVQ6 348 aaPredicted RBP5.04□□□□□ -1.6
CTR9-205ENST00000529898 GGNQ86UU5 652 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 CKAP2LQ8IYA6 745 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 ZCCHC14Q8WYQ9 949 aaKnown RBP5.04□□□□□ -1.6
CTR9-205ENST00000529898 ARMC5Q96C12 935 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 C8orf37Q96NL8 207 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 NUB1Q9Y5A7 615 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 ASXL2Q76L83 1435 aa5.04□□□□□ -1.6
CTR9-205ENST00000529898 FAM47E-STBD1D6RA91 191 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 C1QTNF3-AMACRE9PGA6 284 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 SLC27A2O14975 620 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 SOD2P04179 222 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 RBL2Q08999 1139 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 TUSC3Q13454 348 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 ZNF827Q17R98 1081 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 LONRF2Q1L5Z9 754 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 PAN2Q504Q3 1202 aaKnown RBP5.03□□□□□ -1.6
CTR9-205ENST00000529898 SPATC1Q76KD6 591 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 MAMDC2Q7Z304 686 aaPredicted RBP5.03□□□□□ -1.6
CTR9-205ENST00000529898 LRP10Q7Z4F1 713 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 KLHL36Q8N4N3 616 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 ZBTB38Q8NAP3 1195 aaPredicted RBP5.03□□□□□ -1.6
CTR9-205ENST00000529898 TRIM55Q9BYV6 548 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 TMEM168Q9H0V1 697 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 DLL4Q9NR61 685 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 SIRPGQ9P1W8 387 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 MYRFQ9Y2G1 1151 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 TELO2Q9Y4R8 837 aa5.03□□□□□ -1.6
CTR9-205ENST00000529898 NKRFO15226 690 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTR9-205ENST00000529898 KLHL18O94889 574 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 C6orf222P0C671 652 aaPredicted RBP5.02□□□□□ -1.61
CTR9-205ENST00000529898 EPHB4P54760 987 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 ADAM17P78536 824 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 SERINC3Q13530 473 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 PRAMEF18Q5VWM3 479 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 PLEKHH3Q7Z736 793 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 PTPRN2Q92932 1015 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 YY1AP1Q9H869 796 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 L2HGDHQ9H9P8 463 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 SMPD4Q9NXE4 827 aa5.02□□□□□ -1.61
CTR9-205ENST00000529898 BLACEA4D250 179 aa5.01□□□□□ -1.61
CTR9-205ENST00000529898 ACOT7O00154 380 aa5.01□□□□□ -1.61
CTR9-205ENST00000529898 KNG1P01042 644 aa5.01□□□□□ -1.61
CTR9-205ENST00000529898 GNAT1P11488 350 aa5.01□□□□□ -1.61
CTR9-205ENST00000529898 COL6A2P12110 1019 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms