RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 P2RX5Q93086 422 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 MSLNLQ96KJ4 702 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 RC3H2Q9HBD1 1191 aaKnown RBP12.1□□□□□ -0.47
COPB1-207ENST00000529866 VAT1LQ9HCJ6 419 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 FSD2A1L4K1 749 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 LOC730098B7Z3J9 87 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 SP2Q02086 613 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 COASYQ13057 564 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 CBX2Q14781 532 aaPredicted RBP12.09□□□□□ -0.47
COPB1-207ENST00000529866 ATOH1Q92858 354 aaPredicted RBP12.09□□□□□ -0.47
COPB1-207ENST00000529866 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
COPB1-207ENST00000529866 PHF7Q9BWX1 381 aaPredicted RBP12.09□□□□□ -0.47
COPB1-207ENST00000529866 ALG13Q9NP73 1137 aaKnown RBP12.09□□□□□ -0.47
COPB1-207ENST00000529866 PLAGL2Q9UPG8 496 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 PCDHA1Q9Y5I3 950 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 C5orf42Q9H799 3197 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
COPB1-207ENST00000529866 GCOM1H8Y6P7 765 aaPredicted RBP12.08□□□□□ -0.48
COPB1-207ENST00000529866 ZNF213O14771 459 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 OPLAHO14841 1288 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 ZBTB5O15062 677 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 KDM4AO75164 1064 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 STAM2O75886 525 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 POLR2MP0CAP2 368 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 HOXA13P31271 388 aaPredicted RBP12.08□□□□□ -0.48
COPB1-207ENST00000529866 NUBP1P53384 320 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 ZNF589Q86UQ0 364 aaPredicted RBP12.08□□□□□ -0.48
COPB1-207ENST00000529866 CMTR2Q8IYT2 770 aaKnown RBP12.08□□□□□ -0.48
COPB1-207ENST00000529866 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 LMBR1Q8WVP7 490 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
COPB1-207ENST00000529866 UBAC1Q9BSL1 405 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 FAM86C1Q9NVL1 165 aa12.08□□□□□ -0.48
COPB1-207ENST00000529866 USP15Q9Y4E8 981 aaPredicted RBP12.08□□□□□ -0.48
COPB1-207ENST00000529866 DGKIO75912 1065 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 RPLP2P05387 115 aaKnown RBP12.07□□□□□ -0.48
COPB1-207ENST00000529866 ICAM3P32942 547 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 NRIP1P48552 1158 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 CYFIP1Q7L576 1253 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 FCHSD1Q86WN1 690 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 TRIM50Q86XT4 487 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 ENAHQ8N8S7 591 aaPredicted RBP12.07□□□□□ -0.48
COPB1-207ENST00000529866 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.484e-7■□□□□ 11.1
COPB1-207ENST00000529866 RPGRIP1Q96KN7 1286 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
COPB1-207ENST00000529866 GPR20Q99678 358 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 CLEC1BQ9P126 229 aa12.07□□□□□ -0.48
COPB1-207ENST00000529866 FAM186AA6NE01 2351 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 ENPP3O14638 875 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 FIBPO43427 364 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 CHRNA1P02708 482 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 ITGB1P05556 798 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 STAG3L1P0CL83 205 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 SRGAP2BP0DMP2 458 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 AVPR2P30518 371 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 VCPP55072 806 aaKnown RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 ADAM17P78536 824 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 NMIQ13287 307 aaPredicted RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 CAMK1Q14012 370 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 LPIN1Q14693 890 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 TSHZ1Q6ZSZ6 1077 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 ZBTB33Q86T24 672 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 NPAS4Q8IUM7 802 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 SPPL3Q8TCT6 385 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 POF1BQ8WVV4 589 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 INPP4AQ96PE3 977 aaPredicted RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 CDCA3Q99618 268 aaPredicted RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 FTHL17Q9BXU8 183 aa12.06□□□□□ -0.48
COPB1-207ENST00000529866 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
COPB1-207ENST00000529866 B4E1Z4 1266 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 SP4Q02446 784 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 MGAT3Q09327 533 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 PPFIA1Q13136 1202 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 FBXO47Q5MNV8 452 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
COPB1-207ENST00000529866 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 ADGRD2Q7Z7M1 963 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 RBM23Q86U06 439 aaKnown RBP12.05□□□□□ -0.48
COPB1-207ENST00000529866 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 MTMR8Q96EF0 704 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 ASIC4Q96FT7 647 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
COPB1-207ENST00000529866 KRT23Q9C075 422 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 TLE6Q9H808 572 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 RALGAPA2Q2PPJ7 1873 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
COPB1-207ENST00000529866 KIAA1217Q5T5P2 1943 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms