RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 CKAP4Q07065 602 aaKnown RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 EHHADHQ08426 723 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 ECM1Q16610 540 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 MAN2A1Q16706 1144 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 LRRC55Q6ZSA7 311 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 SNX29Q8TEQ0 813 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 SECISBP2LQ93073 1101 aaKnown RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 NDUFB10O96000 172 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 HIRAP54198 1017 aaPredicted RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 PDIA5Q14554 519 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 SPA17Q15506 151 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 UBE2SQ16763 222 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 TMEM119Q4V9L6 283 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 NBPF12Q5TAG4 269 aaPredicted RBP17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 KCTD1Q719H9 257 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 DDX12PQ92771 950 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 IQCDQ96DY2 449 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 RPGRIP1Q96KN7 1286 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 TMX2Q9Y320 296 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 CAPN6Q9Y6Q1 641 aa17.45■□□□□ 0.38
TM9SF1-208ENST00000529332 TARSL2A2RTX5 802 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 ERCC3P19447 782 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 LRRC41Q15345 812 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 GPIHBP1Q8IV16 184 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 TSGA10Q9BZW7 698 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 MMRN2Q9H8L6 949 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 JMJD4Q9H9V9 463 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 JADE2Q9NQC1 790 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 PCDHA13Q9Y5I0 950 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 SCN4AP35499 1836 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 ABCB11O95342 1321 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 ZMYND10O75800 440 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 KIF11P52732 1056 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 MUM1L1Q5H9M0 696 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 KRT79Q5XKE5 535 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 ADGRF4Q8IZF3 695 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 FAM71BQ8TC56 605 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 GJA10Q969M2 543 aa17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 IFIH1Q9BYX4 1025 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-208ENST00000529332 POLR2AP24928 1970 aaKnown RBP17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 A0A1W2PRG0 241 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 LCA5LO95447 670 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 BMP3P12645 472 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 LRRC63Q05C16 580 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 ZSCAN26Q16670 478 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 BAP1Q92560 729 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 HAS1Q92839 578 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 RIC8AQ9NPQ8 531 aa17.43■□□□□ 0.38
TM9SF1-208ENST00000529332 PNMA6FA0A0J9YX94 578 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 LRRC53A6NM62 1247 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 PHACTR2O75167 634 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 MYBL2P10244 700 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 CLK2P49760 499 aaKnown RBP17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 C2orf54Q08AI8 447 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 TTBK2Q6IQ55 1244 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 RRAGAQ7L523 313 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 CREG2Q8IUH2 290 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 RAB34Q9BZG1 259 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 VIPAS39Q9H9C1 493 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 SNX12Q9UMY4 172 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 MOCS3O95396 460 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 FGFR1OPO95684 399 aaKnown RBP17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 MCM3P25205 808 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 ECE1P42892 770 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 PPP4R3AQ6IN85 833 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 PPP1R18Q6NYC8 613 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 USP50Q70EL3 339 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 SULF1Q8IWU6 871 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 GSPT2Q8IYD1 628 aaKnown RBP17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 TRIM58Q8NG06 486 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 ACER1Q8TDN7 264 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 DNAJC19Q96DA6 116 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 JRKLQ9Y4A0 524 aa17.42■□□□□ 0.38
TM9SF1-208ENST00000529332 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 ZBTB5O15062 677 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 USO1O60763 962 aaKnown RBP17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 SYF2O95926 243 aaKnown RBP17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 SLC16A2P36021 539 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 AARSP49588 968 aaKnown RBP eCLIP17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 COG1Q8WTW3 980 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 MTMR8Q96EF0 704 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 VCPKMTQ9H867 229 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 MED4Q9NPJ6 270 aa17.41■□□□□ 0.38
TM9SF1-208ENST00000529332 DDX25Q9UHL0 483 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms