RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 KATNBL1Q9H079 304 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 UPF3AQ9H1J1 476 aaKnown RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 ZSWIM4Q9H7M6 989 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 PAK6Q9NQU5 681 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 DISC1Q9NRI5 854 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 ERAP1Q9NZ08 941 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 FLRT1Q9NZU1 646 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 RCOR1Q9UKL0 485 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 GNEQ9Y223 722 aaKnown RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 MROH7Q68CQ1 1323 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 EMSYQ7Z589 1322 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 VWA3AA6NCI4 1184 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 DDX11L8A8MPP1 907 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 DNM1LO00429 736 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 DYNC1LI2O43237 492 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 SLC37A4O43826 429 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 RGS20O76081 388 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 C6orf222P0C671 652 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 ARP10275 920 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 CCL5P13501 91 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 SMPD1P17405 629 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 QARSP47897 775 aaKnown RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 ACTR2P61160 394 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 PSMC5P62195 406 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 DNM1Q05193 864 aaKnown RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 PTPN11Q06124 597 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 LY6KQ17RY6 165 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 EARS2Q5JPH6 523 aaKnown RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 GNASQ5JWF2 1037 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 ADALQ6DHV7 355 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 CCDC73Q6ZRK6 1079 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 CYFIP1Q7L576 1253 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 IGSF22Q8N9C0 903 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 AFAP1L1Q8TED9 768 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 GLG1Q92896 1179 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 LENG9Q96B70 501 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 GLT1D1Q96MS3 346 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 USP28Q96RU2 1077 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 MTG1Q9BT17 334 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 POLR3CQ9BUI4 534 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-211ENST00000528787 CUEDC2Q9H467 287 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 MAGEF1Q9HAY2 307 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 NRBP2Q9NSY0 501 aa8.9□□□□□ -0.98
SSBP3-211ENST00000528787 A0A1W2PQ27 194 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 A0A1W2PQ64 194 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 A0A1W2PQD8 194 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 GAS2O43903 313 aaKnown RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 ATG7O95352 703 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 SGPL1O95470 568 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 MMP3P08254 477 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 SUPT20HL2P0C7V6 817 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 RPA1P27694 616 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 ABCD1P33897 745 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 TCF7P36402 384 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 TECP42680 631 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 GJA8P48165 433 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 STAT5BP51692 787 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 CDC42EP1Q00587 391 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 AMPD3Q01432 767 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 ARHGAP1Q07960 439 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 PKP1Q13835 747 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 PTPAQ15257 358 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 PRAMEF19Q5SWL8 479 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 NCAPH2Q6IBW4 605 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 KANK3Q6NY19 840 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 CYP2W1Q8TAV3 490 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 HAS1Q92839 578 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 NACC1Q96RE7 527 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 GPR20Q99678 358 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 TIPINQ9BVW5 301 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 GTPBP4Q9BZE4 634 aaKnown RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 CCSER1Q9C0I3 900 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 MCOLN1Q9GZU1 580 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 ZNF302Q9NR11 478 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 PDGFCQ9NRA1 345 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 BMP2KQ9NSY1 1161 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-211ENST00000528787 KCND2Q9NZV8 630 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 STK17AQ9UEE5 414 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 DNM3Q9UQ16 869 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 CLIC4Q9Y696 253 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 WDR81Q562E7 1941 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 FRMPD3Q5JV73 1810 aa8.89□□□□□ -0.99
SSBP3-211ENST00000528787 COL1A2P08123 1366 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 SYNRGQ9UMZ2 1314 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 FAM205CA6NFA0 338 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 RRN3P2A6NIE6 340 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 DHX15O43143 795 aaKnown RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 HBP1O60381 514 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 LGR5O75473 907 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 LYPLA2O95372 231 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 MYL1P05976 194 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 SCP2P22307 547 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 CMA1P23946 247 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 TMOD1P28289 359 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms