RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 KIF11P52732 1056 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 ADCY1Q08828 1119 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 RPS6KA1Q15418 735 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 KCTD19Q17RG1 926 aaPredicted RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 ANKRD20A8PQ5CZ79 823 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 PEX26Q7Z412 305 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 DDX25Q9UHL0 483 aaKnown RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 DNM1LO00429 736 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 SPOPO43791 374 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 VIMP08670 466 aaKnown RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 TNNC1P63316 161 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 TXNRD1Q16881 649 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 CAPRIN2Q6IMN6 1127 aaKnown RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 PHLDB2Q86SQ0 1253 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 NKX2-3Q8TAU0 364 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 P2RX5Q93086 422 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 OVOS2A0A0G2JMS6 1433 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 CLRN2A0PK11 232 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 TNFAIP3P21580 790 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 HOXA13P31271 388 aaPredicted RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 FAM84BQ96KN1 310 aaPredicted RBP19.51■□□□□ 0.71
LTBP3-210ENST00000528516 STK38LQ9Y2H1 464 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 L3MBTL1Q9Y468 752 aa19.51■□□□□ 0.71
LTBP3-210ENST00000528516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L15C9J2P7 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L13C9JLJ4 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L11C9JVI0 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L18D6R9N7 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L22D6RA61 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L17D6RBQ6 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L19D6RCP7 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L20D6RJB6 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 LRRN2O75325 713 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 LONP1P36776 959 aaKnown RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L24Q0WX57 530 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 RBBP5Q15291 538 aaKnown RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L6PQ6QN14 398 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 SPATA20Q8TB22 786 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 MGARPQ8TDB4 240 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 FAM167BQ9BTA0 163 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 CTTNBP2NLQ9P2B4 639 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 PACSIN2Q9UNF0 486 aaPredicted RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 ATP6V0A2Q9Y487 856 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 ATXN2Q99700 1313 aaKnown RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 TCP10L2B9ZVM9 353 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 DDAH1O94760 285 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 EEF1GP26641 437 aaKnown RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 WLSQ5T9L3 541 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 FAM133AQ8N9E0 248 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 LARP4BQ92615 738 aaKnown RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 CAVIN3Q969G5 261 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 FAM217BQ9NTX9 383 aaPredicted RBP19.5■□□□□ 0.71
LTBP3-210ENST00000528516 XDHP47989 1333 aa19.5■□□□□ 0.71
LTBP3-210ENST00000528516 FECHP22830 423 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 IFI16Q16666 785 aaKnown RBP19.49■□□□□ 0.71
LTBP3-210ENST00000528516 GSTA5Q7RTV2 222 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 TMC4Q7Z404 712 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 TMEM47Q9BQJ4 181 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 OSBPL7Q9BZF2 842 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 USP17L5A8MUK1 530 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 CTNND1O60716 968 aaKnown RBP19.49■□□□□ 0.71
LTBP3-210ENST00000528516 TRIM68Q6AZZ1 485 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 CAPN12Q6ZSI9 719 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 RBM17Q96I25 401 aaKnown RBP19.49■□□□□ 0.71
LTBP3-210ENST00000528516 DISC1Q9NRI5 854 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 USP21Q9UK80 565 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 MYH8P13535 1937 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 FOXP2O15409 715 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 BIRC3Q13489 604 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 GLE1Q53GS7 698 aaKnown RBP19.49■□□□□ 0.71
LTBP3-210ENST00000528516 STXBP4Q6ZWJ1 553 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 CCDC197Q8NCU1 140 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 LRRC45Q96CN5 670 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 SH3GL3Q99963 347 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 SAMD15Q9P1V8 674 aa19.49■□□□□ 0.71
LTBP3-210ENST00000528516 ARMCX3Q9UH62 379 aaPredicted RBP19.49■□□□□ 0.71
LTBP3-210ENST00000528516 QPCTQ16769 361 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 NBPF9Q3BBW0 867 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 SH2D3AQ9BRG2 576 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 LEMD3Q9Y2U8 911 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 MAGOHP61326 146 aaKnown RBP19.48■□□□□ 0.71
LTBP3-210ENST00000528516 KCNB1Q14721 858 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 PPP4R3AQ6IN85 833 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 MAGOHBQ96A72 148 aaKnown RBP19.48■□□□□ 0.71
LTBP3-210ENST00000528516 SH2D4AQ9H788 454 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 USTQ9Y2C2 406 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 LRRC10BA6NIK2 292 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 RPL13P26373 211 aaKnown RBP19.48■□□□□ 0.71
LTBP3-210ENST00000528516 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
LTBP3-210ENST00000528516 WHAMMQ8TF30 809 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 FRMD4BQ9Y2L6 1034 aa19.48■□□□□ 0.71
LTBP3-210ENST00000528516 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
LTBP3-210ENST00000528516 LMBR1Q8WVP7 490 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 WDR19Q8NEZ3 1342 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 A0A1W2PRG0 241 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 DIAPH2O60879 1101 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 NR2F2P24468 414 aa19.47■□□□□ 0.71
LTBP3-210ENST00000528516 CDK8P49336 464 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms