RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 RHOBTB3O94955 611 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 KRT18P05783 430 aaKnown RBP8.58□□□□□ -1.04
SOX6-211ENST00000528429 FDX1P10109 184 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 ITGB5P18084 799 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 LRMPQ12912 555 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 PABPC4Q13310 644 aaKnown RBP eCLIP8.58□□□□□ -1.04
SOX6-211ENST00000528429 STIM1Q13586 685 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 KCNB1Q14721 858 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 ARID5BQ14865 1188 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 SPATA1Q5VX52 437 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 GPBP1Q86WP2 473 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 CATSPER3Q86XQ3 398 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 MICAL1Q8TDZ2 1067 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
SOX6-211ENST00000528429 C7orf25Q9BPX7 421 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 TEX13BQ9BXU2 312 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 WDR11Q9BZH6 1224 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 HOXC10Q9NYD6 342 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
SOX6-211ENST00000528429 VAV3Q9UKW4 847 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 R3HCC1Q9Y3T6 440 aaKnown RBP8.58□□□□□ -1.04
SOX6-211ENST00000528429 NUB1Q9Y5A7 615 aa8.58□□□□□ -1.04
SOX6-211ENST00000528429 IPO5O00410 1097 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 PSMA7O14818 248 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 CAPN15O75808 1086 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PLA2G4BP0C869 781 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 CDC25BP30305 580 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PSMC6P62333 389 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 STK4Q13043 487 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 SETDB1Q15047 1291 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 ARHGEF16Q5VV41 709 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 EIF2AK1Q9BQI3 630 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 MXRA8Q9BRK3 442 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PAGR1Q9BTK6 254 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 BMP2KQ9NSY1 1161 aaPredicted RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 TBC1D7Q9P0N9 293 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 UQCRHLA0A096LP55 91 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 NPHP3-ACAD11A0A0J9YXS1 232 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 DYNC1I1O14576 645 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 UQCRHP07919 91 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 BIRC2Q13490 618 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 CTTNQ14247 550 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 TRMT1LQ7Z2T5 733 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 ERO1BQ86YB8 467 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 TPH2Q8IWU9 490 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 C17orf53Q8N3J3 647 aaPredicted RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 GIMAP8Q8ND71 665 aaPredicted RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 REPS2Q8NFH8 660 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 CXorf38Q8TB03 319 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 KCNH7Q9NS40 1196 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 DNM3Q9UQ16 869 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PSMD10O75832 226 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 SPATA31C1P0DKV0 1188 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 ZNF18P17022 549 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 RPA1P27694 616 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PMS1P54277 932 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 MRPS9P82933 396 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 IRF5Q13568 498 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 MTMR1Q13613 665 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 ZRSR2Q15696 482 aaKnown RBP8.57□□□□□ -1.04
SOX6-211ENST00000528429 CNNM4Q6P4Q7 775 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 OTOP1Q7RTM1 612 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 ADSSL1Q8N142 457 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PIGOQ8TEQ8 1089 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 OPTNQ96CV9 577 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 TEKT3Q9BXF9 490 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 RWDD2AQ9UIY3 292 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 SAMM50Q9Y512 469 aa8.57□□□□□ -1.04
SOX6-211ENST00000528429 PES1O00541 588 aaKnown RBP8.56□□□□□ -1.04
SOX6-211ENST00000528429 TPM3P06753 285 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PPATQ06203 517 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 MKRN3Q13064 507 aaKnown RBP8.56□□□□□ -1.04
SOX6-211ENST00000528429 PGM5Q15124 567 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 LRRC41Q15345 812 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 TKFCQ3LXA3 575 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 HYIQ5T013 277 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 UNC13DQ70J99 1090 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 ARMC9Q7Z3E5 817 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PNMA8AQ86V59 439 aaPredicted RBP8.56□□□□□ -1.04
SOX6-211ENST00000528429 CACTINQ8WUQ7 758 aaKnown RBP8.56□□□□□ -1.04
SOX6-211ENST00000528429 SLC5A5Q92911 643 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 DYDC2Q96IM9 177 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 NCAPGQ9BPX3 1015 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PDCD2LQ9BRP1 358 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 LRRC27Q9C0I9 530 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 UNC45AQ9H3U1 944 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 ACAD9Q9H845 621 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PXMP2Q9NR77 195 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 RPTORQ8N122 1335 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 SPDYE5A6NIY4 337 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 NAT1P18440 290 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PAX7P23759 505 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 OAZ1P54368 228 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PCNX4Q63HM2 1172 aa8.56□□□□□ -1.04
SOX6-211ENST00000528429 PPP4R3CPQ6ZMV5 832 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms