RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 GLG1Q92896 1179 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
SDHD-205ENST00000528048 GTF3C6Q969F1 213 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
SDHD-205ENST00000528048 HDAC6Q9UBN7 1215 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
SDHD-205ENST00000528048 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 MKI67P46013 3256 aaKnown RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 RBM25P49756 843 aaKnown RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 CCL23P55773 120 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 SETQ01105 290 aaPredicted RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 RABEP1Q15276 862 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 PDCD7Q8N8D1 485 aaKnown RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 SMARCAD1Q9H4L7 1026 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 AZI2Q9H6S1 392 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 AGO4Q9HCK5 861 aaKnown RBP13.77□□□□□ -0.21
SDHD-205ENST00000528048 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 SLC9A2Q9UBY0 812 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 KCNJ14Q9UNX9 436 aa13.77□□□□□ -0.21
SDHD-205ENST00000528048 NFASCO94856 1347 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 C17orf102A2RUQ5 167 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 HAS3O00219 553 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 SHHQ15465 462 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 PRR16Q569H4 304 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 GDF6Q6KF10 455 aaPredicted RBP13.76□□□□□ -0.21
SDHD-205ENST00000528048 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 AIFM3Q96NN9 605 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 ZNF577Q9BSK1 485 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 MTIF3Q9H2K0 278 aaKnown RBP13.76□□□□□ -0.21
SDHD-205ENST00000528048 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
SDHD-205ENST00000528048 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 PDE4DIPQ5VU43 2346 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
SDHD-205ENST00000528048 FAM86B1E9PN63 330 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 IPO5O00410 1097 aaKnown RBP13.75□□□□□ -0.21
SDHD-205ENST00000528048 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 CSF2RAP15509 400 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
SDHD-205ENST00000528048 LRIT3Q3SXY7 679 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
SDHD-205ENST00000528048 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 TBCKQ8TEA7 893 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
SDHD-205ENST00000528048 LLPHQ9BRT6 129 aaKnown RBP13.75□□□□□ -0.21
SDHD-205ENST00000528048 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 ERAP1Q9NZ08 941 aa13.75□□□□□ -0.21
SDHD-205ENST00000528048 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
SDHD-205ENST00000528048 GSTTP1A0A1W2PQM5 241 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 DDX39AO00148 427 aaKnown RBP13.74□□□□□ -0.21
SDHD-205ENST00000528048 BACH1O14867 736 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 MARCH6O60337 910 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 FGBP02675 491 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 SMIM10L2AP0DMW4 78 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 SMIM10L2BP0DMW5 78 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 ACRP10323 421 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 CIITAP33076 1130 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 RFC2P35250 354 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
SDHD-205ENST00000528048 ACTR2P61160 394 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 PTK7Q13308 1070 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 SAFBQ15424 915 aaKnown RBP eCLIP13.74□□□□□ -0.21
SDHD-205ENST00000528048 CCDC83Q8IWF9 413 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 NSUN7Q8NE18 718 aaKnown RBP13.74□□□□□ -0.21
SDHD-205ENST00000528048 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 CRYGNQ8WXF5 182 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 ATP6V0A1Q93050 837 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
SDHD-205ENST00000528048 LARGE1O95461 756 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 SELPP16109 830 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 KRT2P35908 639 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 STAT5BP51692 787 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 EPHB4P54760 987 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 ITGB3BPQ13352 177 aaPredicted RBP13.73□□□□□ -0.21
SDHD-205ENST00000528048 C9orf50Q5SZB4 431 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 FAM160B1Q5W0V3 765 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 MIS18BP1Q6P0N0 1132 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 KIF2CQ99661 725 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
SDHD-205ENST00000528048 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
SDHD-205ENST00000528048 RNPEPQ9H4A4 650 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 SETD4Q9NVD3 440 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 SAMM50Q9Y512 469 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 SMCHD1A6NHR9 2005 aa13.73□□□□□ -0.21
SDHD-205ENST00000528048 UMODL1Q5DID0 1318 aa13.72□□□□□ -0.21
SDHD-205ENST00000528048 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
SDHD-205ENST00000528048 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
SDHD-205ENST00000528048 RRN3P2A6NIE6 340 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms