RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 EPN1Q9Y6I3 576 aaPredicted RBP16.49■□□□□ 0.23
USP47-207ENST00000527733 TBX3O15119 743 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 EVCP57679 992 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 PSMC5P62195 406 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
USP47-207ENST00000527733 FBXL16Q8N461 479 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 VAV2P52735 878 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 SFR1Q86XK3 245 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 TCP11Q8WWU5 503 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
USP47-207ENST00000527733 EIF2AK1Q9BQI3 630 aaKnown RBP16.49■□□□□ 0.23
USP47-207ENST00000527733 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 ATP6V0A4Q9HBG4 840 aa16.49■□□□□ 0.23
USP47-207ENST00000527733 ASB14A6NK59 587 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 LXNQ9BS40 222 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 GABBR1Q9UBS5 961 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 PCDHA10Q9Y5I2 948 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 TOPAZ1Q8N9V7 1692 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
USP47-207ENST00000527733 ZNF354CQ86Y25 554 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 TSPYL1Q9H0U9 437 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 HAUS4Q9H6D7 363 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 BZW2Q9Y6E2 419 aaKnown RBP16.48■□□□□ 0.23
USP47-207ENST00000527733 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 RHOXF2BP0C7M4 288 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 SRGAP2CP0DJJ0 459 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 SWSAP1Q6NVH7 229 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 RHOXF2Q9BQY4 288 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 MAK16Q9BXY0 300 aaKnown RBP16.48■□□□□ 0.23
USP47-207ENST00000527733 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
USP47-207ENST00000527733 ECE1P42892 770 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 RPS6KA1Q15418 735 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 ZKSCAN4Q969J2 545 aaPredicted RBP16.48■□□□□ 0.23
USP47-207ENST00000527733 MRIQ9BWK5 157 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 NDST4Q9H3R1 872 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 NRBP1Q9UHY1 535 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 PPP2R2CQ9Y2T4 447 aa16.48■□□□□ 0.23
USP47-207ENST00000527733 SLIT2O94813 1529 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 H2AFZP0C0S5 128 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 PIK3CAP42336 1068 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 PDE6CP51160 858 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 MFAP3P55082 362 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 H2AFVQ71UI9 128 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 CCDC26Q8TAB7 109 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 IPO4Q8TEX9 1081 aaKnown RBP16.47■□□□□ 0.23
USP47-207ENST00000527733 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 ZNF302Q9NR11 478 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 KCNQ5Q9NR82 932 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 SEL1LQ9UBV2 794 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 HSF2BPO75031 334 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 BPIFB4P59827 614 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 DPF2Q92785 391 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 NR3C2P08235 984 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 ABCB4P21439 1286 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 COASYQ13057 564 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 TCP11X2Q5H9J9 407 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 GAKO14976 1311 aa16.47■□□□□ 0.23
USP47-207ENST00000527733 WNT10BO00744 389 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 SHMT1P34896 483 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 MXI1P50539 228 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 SLFN12LQ6IEE8 588 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 KCNV1Q6PIU1 500 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 TTC16Q8NEE8 873 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 TRIM58Q8NG06 486 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 FERP16591 822 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 PRCPP42785 496 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 KRT31Q15323 416 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 PPP1R7Q15435 360 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 VSTM4Q8IW00 320 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 PROM2Q8N271 834 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 DAGLBQ8NCG7 672 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 DDX4Q9NQI0 724 aaKnown RBP16.46■□□□□ 0.23
USP47-207ENST00000527733 H0YHG0 523 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 Q3C1V9 767 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 FKBP1CQ5VVH2 108 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 CCDC155Q8N6L0 562 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 ST7Q9NRC1 585 aa16.46■□□□□ 0.23
USP47-207ENST00000527733 PTK2Q05397 1052 aa16.46■□□□□ 0.22
USP47-207ENST00000527733 NBPF12Q5TAG4 269 aaPredicted RBP16.46■□□□□ 0.22
USP47-207ENST00000527733 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.22
USP47-207ENST00000527733 RPS6KC1Q96S38 1066 aa16.46■□□□□ 0.22
USP47-207ENST00000527733 TUFT1Q9NNX1 390 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms