RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 ARP10275 920 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 KCNA2P16389 499 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 PTGS1P23219 599 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 CNGA1P29973 690 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 TRAPPC10P48553 1259 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 TNFAIP2Q03169 654 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 MTMR1Q13613 665 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 PKP1Q13835 747 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 BRAPQ7Z569 592 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 EMID1Q96A84 441 aaPredicted RBP13.39□□□□□ -0.27
PSMD13-206ENST00000527047 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
PSMD13-206ENST00000527047 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 SENP7Q9BQF6 1050 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 UPF3AQ9H1J1 476 aaKnown RBP13.39□□□□□ -0.27
PSMD13-206ENST00000527047 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 WDR81Q562E7 1941 aa13.39□□□□□ -0.27
PSMD13-206ENST00000527047 SLC37A4O43826 429 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 ATP9AO75110 1047 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 TXNP10599 105 aaKnown RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 UBA1P22314 1058 aaKnown RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 ZNF76P36508 570 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 SETQ01105 290 aaPredicted RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 ARHGAP1Q07960 439 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 LETM2Q2VYF4 491 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 PRR16Q569H4 304 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 GJC2Q5T442 439 aaPredicted RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 DEFB118Q96PH6 123 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 BCAS3Q9H6U6 928 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 AGO4Q9HCK5 861 aaKnown RBP13.38□□□□□ -0.27
PSMD13-206ENST00000527047 KCNMB3Q9NPA1 279 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
PSMD13-206ENST00000527047 DHX15O43143 795 aaKnown RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 ADAMTS4O75173 837 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 MYCP01106 439 aaPredicted RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 ZSCAN22P10073 491 aaPredicted RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 RARBP10826 455 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 GJA8P48165 433 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 GJA9P57773 515 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 ORC2Q13416 577 aaPredicted RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 CELF3Q5SZQ8 465 aaKnown RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 MYSM1Q5VVJ2 828 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 KLHDC9Q8NEP7 349 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 COPS5Q92905 334 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 DDX25Q9UHL0 483 aaKnown RBP13.37□□□□□ -0.27
PSMD13-206ENST00000527047 OGDHLQ9ULD0 1010 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 BRCA2P51587 3418 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 NFASCO94856 1347 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
PSMD13-206ENST00000527047 IPO5O00410 1097 aaKnown RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 MSH4O15457 936 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 SGPL1O95470 568 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 BRD1O95696 1058 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 GH1P01241 217 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 NEDD9Q14511 834 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 TTC38Q5R3I4 469 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 CCSAPQ6IQ19 270 aaPredicted RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 METTL7BQ6UX53 244 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 TLK2Q86UE8 772 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 HAS1Q92839 578 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
PSMD13-206ENST00000527047 PCDHB6Q9Y5E3 794 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 TCHHQ07283 1943 aa13.36□□□□□ -0.27
PSMD13-206ENST00000527047 MYADML2A6NDP7 307 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 A6NJR5 290 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 TBX3O15119 743 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 DYNC1LI2O43237 492 aaPredicted RBP13.35□□□□□ -0.27
PSMD13-206ENST00000527047 PSMD10O75832 226 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 GGPS1O95749 300 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 F13A1P00488 732 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 PGK1P00558 417 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 CAPN2P17655 700 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 B3GNT9Q6UX72 402 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
PSMD13-206ENST00000527047 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms