RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MIER3Q7Z3K6 550 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 LEO1Q8WVC0 666 aaPredicted RBP15.46■□□□□ 0.07
CD44-224ENST00000526669 PAK6Q9NQU5 681 aaPredicted RBP15.46■□□□□ 0.07
CD44-224ENST00000526669 SAMM50Q9Y512 469 aa15.46■□□□□ 0.07
CD44-224ENST00000526669 ELP1O95163 1332 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 ALPK3Q96L96 1907 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 GSTTP1A0A1W2PQM5 241 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 PP2D1A8MPX8 630 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 ADAMTS4O75173 837 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 MMP3P08254 477 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 MYL3P08590 195 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 PRPHP41219 470 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 GJA9P57773 515 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 KRT76Q01546 638 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 SPIRE1Q08AE8 756 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 SPECC1Q5M775 1068 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 GPR20Q99678 358 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 UPF3AQ9H1J1 476 aaKnown RBP15.45■□□□□ 0.06
CD44-224ENST00000526669 FBXO2Q9UK22 296 aaPredicted RBP15.45■□□□□ 0.06
CD44-224ENST00000526669 BRCA2P51587 3418 aa15.45■□□□□ 0.06
CD44-224ENST00000526669 CTAGE5O15320 804 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 MSCO60682 206 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 ZNF286BP0CG31 522 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 CDC25AP30304 524 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 TCF7P36402 384 aaPredicted RBP15.44■□□□□ 0.06
CD44-224ENST00000526669 ME1P48163 572 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.06
CD44-224ENST00000526669 PPP2R5CQ13362 524 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 FSCN1Q16658 493 aaKnown RBP15.44■□□□□ 0.06
CD44-224ENST00000526669 ARL6IP4Q66PJ3 421 aaKnown RBP15.44■□□□□ 0.06
CD44-224ENST00000526669 ZNF746Q6NUN9 644 aaPredicted RBP15.44■□□□□ 0.06
CD44-224ENST00000526669 B3GNT9Q6UX72 402 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 TRIM50Q86XT4 487 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 PPTC7Q8NI37 304 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 EMID1Q96A84 441 aaPredicted RBP15.44■□□□□ 0.06
CD44-224ENST00000526669 SPC25Q9HBM1 224 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 DISC1Q9NRI5 854 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 RCOR1Q9UKL0 485 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 Q9Y3F1 56 aa15.44■□□□□ 0.06
CD44-224ENST00000526669 SRPRBQ9Y5M8 271 aaKnown RBP15.44■□□□□ 0.06
CD44-224ENST00000526669 WDR64B1ANS9 1081 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 BACH1O14867 736 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 PPP6R2O75170 966 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 SUPT20HL2P0C7V6 817 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 CYP4A11Q02928 519 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 LRRC41Q15345 812 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 GNASQ5JWF2 1037 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 CCDC60Q8IWA6 550 aaPredicted RBP15.43■□□□□ 0.06
CD44-224ENST00000526669 KRI1Q8N9T8 703 aaKnown RBP15.43■□□□□ 0.06
CD44-224ENST00000526669 BANK1Q8NDB2 785 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 KCNG4Q8TDN1 519 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 PPP1R13LQ8WUF5 828 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 SEPT1Q8WYJ6 367 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 DYDC2Q96IM9 177 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 SCAND2PQ9GZW5 306 aaPredicted RBP15.43■□□□□ 0.06
CD44-224ENST00000526669 CSRNP2Q9H175 543 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 PCDHA7Q9UN72 937 aa15.43■□□□□ 0.06
CD44-224ENST00000526669 LGALS2P05162 132 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 CPT1AP50416 773 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 JAK3P52333 1124 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 CHMP4BP1P59074 171 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 ZRSR1Q15695 479 aaKnown RBP15.42■□□□□ 0.06
CD44-224ENST00000526669 UGCGQ16739 394 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 MIS18BP1Q6P0N0 1132 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 ABHD15Q6UXT9 468 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
CD44-224ENST00000526669 IGSF22Q8N9C0 903 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 KLHDC9Q8NEP7 349 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 U2AF1L4Q8WU68 220 aaKnown RBP15.42■□□□□ 0.06
CD44-224ENST00000526669 FERMT2Q96AC1 680 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 PCYT2Q99447 389 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 EIF2AK1Q9BQI3 630 aaKnown RBP15.42■□□□□ 0.06
CD44-224ENST00000526669 RGL1Q9NZL6 768 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 GABBR1Q9UBS5 961 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 PCDHA10Q9Y5I2 948 aa15.42■□□□□ 0.06
CD44-224ENST00000526669 A6NJR5 290 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 CUTAO60888 179 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 ATG7O95352 703 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 SGPL1O95470 568 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 TFRCP02786 760 aaKnown RBP15.41■□□□□ 0.06
CD44-224ENST00000526669 PSAPP07602 524 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 GJB1P08034 283 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 MARK3P27448 753 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 SFNP31947 248 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 CTTNQ14247 550 aaKnown RBP15.41■□□□□ 0.06
CD44-224ENST00000526669 EPHA7Q15375 998 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 KCNA10Q16322 511 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 DGKDQ16760 1214 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 BRDTQ58F21 947 aaPredicted RBP15.41■□□□□ 0.06
CD44-224ENST00000526669 SWSAP1Q6NVH7 229 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 USP49Q70CQ1 688 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 RNF180Q86T96 592 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 SMAP1Q8IYB5 467 aaPredicted RBP15.41■□□□□ 0.06
CD44-224ENST00000526669 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 PLIN2Q99541 437 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 RAB34Q9BZG1 259 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 ZNF302Q9NR11 478 aa15.41■□□□□ 0.06
CD44-224ENST00000526669 A0A087WWV3 80 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms