RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 ITGB4P16144 1822 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 KRT40Q6A162 431 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 LRIG3Q6UXM1 1119 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 ANKRD27Q96NW4 1050 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 MAST3O60307 1309 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 PPP1R3GB7ZBB8 358 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 HNRNPRO43390 633 aaKnown RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 GPIHBP1Q8IV16 184 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 SLC35B4Q969S0 331 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 DNAJC7Q99615 494 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 ALG1Q9BT22 464 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 LIMA1Q9UHB6 759 aaKnown RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 ACTN4O43707 911 aaKnown RBP16.15■□□□□ 0.18
LTBP3-204ENST00000525443 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
LTBP3-204ENST00000525443 PDE8BO95263 885 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 MMEP08473 750 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 SPATA31D3P0C874 917 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 MCL1Q07820 350 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 KRT71Q3SY84 523 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 BARGINQ6ZT62 677 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 CEP128Q6ZU80 1094 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 SPATA31D4Q6ZUB0 917 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 RNF168Q8IYW5 571 aaPredicted RBP16.15■□□□□ 0.18
LTBP3-204ENST00000525443 AGPAT5Q9NUQ2 364 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 NUP188Q5SRE5 1749 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 H0Y3Z8 333 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 SEMA3EO15041 775 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 PENKP01210 267 aaPredicted RBP16.15■□□□□ 0.18
LTBP3-204ENST00000525443 CBX3Q13185 183 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
LTBP3-204ENST00000525443 ARHGEF3Q9NR81 526 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 SCOCQ9UIL1 159 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
LTBP3-204ENST00000525443 PALM3A6NDB9 673 aaPredicted RBP16.14■□□□□ 0.17
LTBP3-204ENST00000525443 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 ZNF263O14978 683 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 ASAP2O43150 1006 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 CHN1P15882 459 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 GBP1P32455 592 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 COPS2P61201 443 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 HAND2P61296 217 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.17
LTBP3-204ENST00000525443 KCNJ12Q14500 433 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 ZNF662Q6ZS27 426 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 STAMQ92783 540 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 SELENOSQ9BQE4 189 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
LTBP3-204ENST00000525443 IMMTQ16891 758 aaKnown RBP16.14■□□□□ 0.17
LTBP3-204ENST00000525443 INF2Q27J81 1249 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 P3H1Q32P28 736 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 SPATA20Q8TB22 786 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 DNAJC9Q8WXX5 260 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 USH1CQ9Y6N9 552 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 LTBP4Q8N2S1 1624 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 MCAMP43121 646 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 RETREG2Q8NC44 543 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 DDX23Q9BUQ8 820 aaKnown RBP16.14■□□□□ 0.17
LTBP3-204ENST00000525443 RAB17Q9H0T7 212 aa16.14■□□□□ 0.17
LTBP3-204ENST00000525443 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 CALB2P22676 271 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 PLS1Q14651 629 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 AGBL2Q5U5Z8 902 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 RASIP1Q5U651 963 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 TMEM110Q86TL2 294 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 KLHL7Q8IXQ5 586 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 DSCC1Q9BVC3 393 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 CARD9Q9H257 536 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 TMEM221A6NGB7 291 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 SUPT3HO75486 399 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 GNA14O95837 355 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 PRLRP16471 622 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 CCNFP41002 786 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 PHKA1P46020 1223 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 IFNAR2P48551 515 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 SAFBQ15424 915 aaKnown RBP eCLIP16.13■□□□□ 0.17
LTBP3-204ENST00000525443 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 RNPEPL1Q9HAU8 725 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 FBXL5Q9UKA1 691 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 CHMP2BQ9UQN3 213 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 MYH1P12882 1939 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 TJP1Q07157 1748 aa16.13■□□□□ 0.17
LTBP3-204ENST00000525443 RAD51CO43502 376 aa16.12■□□□□ 0.17
LTBP3-204ENST00000525443 PLEKP08567 350 aaPredicted RBP16.12■□□□□ 0.17
LTBP3-204ENST00000525443 ETS2P15036 469 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms