RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 GJD3Q8N144 294 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 BANK1Q8NDB2 785 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 CTCFLQ8NI51 663 aaPredicted RBP27.6■■■□□ 2.01
USP47-205ENST00000525257 SPZ1Q9BXG8 430 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 KAT6AQ92794 2004 aa27.6■■■□□ 2.01
USP47-205ENST00000525257 RALGAPA2Q2PPJ7 1873 aa27.59■■■□□ 2.01
USP47-205ENST00000525257 H3BQ06 376 aaPredicted RBP27.59■■■□□ 2.01
USP47-205ENST00000525257 MEIS2O14770 477 aa27.59■■■□□ 2.01
USP47-205ENST00000525257 FAM26DQ5JW98 314 aa27.59■■■□□ 2.01
USP47-205ENST00000525257 NLRX1Q86UT6 975 aa27.59■■■□□ 2.01
USP47-205ENST00000525257 ZNF654Q8IZM8 581 aa27.59■■■□□ 2.01
USP47-205ENST00000525257 SENP7Q9BQF6 1050 aa27.59■■■□□ 2.01
USP47-205ENST00000525257 SEC63Q9UGP8 760 aaKnown RBP27.59■■■□□ 2.01
USP47-205ENST00000525257 SGSM2O43147 1006 aa27.58■■■□□ 2.01
USP47-205ENST00000525257 SSTR3P32745 418 aaPredicted RBP27.58■■■□□ 2.01
USP47-205ENST00000525257 TCEAL5Q5H9L2 206 aa27.58■■■□□ 2.01
USP47-205ENST00000525257 XRRA1Q6P2D8 792 aa27.58■■■□□ 2.01
USP47-205ENST00000525257 RUFY4Q6ZNE9 571 aa27.58■■■□□ 2.01
USP47-205ENST00000525257 LY9Q9HBG7 655 aa27.58■■■□□ 2.01
USP47-205ENST00000525257 NRCAMQ92823 1304 aa27.58■■■□□ 2.01
USP47-205ENST00000525257 PIK3CDO00329 1044 aa27.57■■■□□ 2
USP47-205ENST00000525257 DDAH1O94760 285 aa27.57■■■□□ 2
USP47-205ENST00000525257 CHRNA1P02708 482 aa27.57■■■□□ 2
USP47-205ENST00000525257 GHRP10912 638 aa27.57■■■□□ 2
USP47-205ENST00000525257 KIF5BP33176 963 aa27.57■■■□□ 2
USP47-205ENST00000525257 TCF7P36402 384 aaPredicted RBP27.57■■■□□ 2
USP47-205ENST00000525257 EP400NLQ6ZTU2 488 aa27.57■■■□□ 2
USP47-205ENST00000525257 NEK9Q8TD19 979 aa27.57■■■□□ 2
USP47-205ENST00000525257 MAP3K14Q99558 947 aa27.57■■■□□ 2
USP47-205ENST00000525257 GRXCR2A6NFK2 248 aa27.56■■■□□ 2
USP47-205ENST00000525257 PLEKHA8P1O95397 391 aa27.56■■■□□ 2
USP47-205ENST00000525257 GIMAP8Q8ND71 665 aaPredicted RBP27.56■■■□□ 2
USP47-205ENST00000525257 IL17RAQ96F46 866 aa27.56■■■□□ 2
USP47-205ENST00000525257 ATP9AO75110 1047 aa27.55■■■□□ 2
USP47-205ENST00000525257 MARK3P27448 753 aa27.55■■■□□ 2
USP47-205ENST00000525257 CTNNB1P35222 781 aa27.55■■■□□ 2
USP47-205ENST00000525257 PPFIA1Q13136 1202 aa27.55■■■□□ 2
USP47-205ENST00000525257 FIBCD1Q8N539 461 aa27.55■■■□□ 2
USP47-205ENST00000525257 NSUN3Q9H649 340 aaKnown RBP27.55■■■□□ 2
USP47-205ENST00000525257 ARIH1Q9Y4X5 557 aaPredicted RBP27.55■■■□□ 2
USP47-205ENST00000525257 RBM8AQ9Y5S9 174 aaKnown RBP27.55■■■□□ 2
USP47-205ENST00000525257 ATG2AQ2TAZ0 1938 aa27.55■■■□□ 2
USP47-205ENST00000525257 KCNA2P16389 499 aa27.54■■■□□ 2
USP47-205ENST00000525257 MYO7AQ13402 2215 aa27.54■■■□□ 2
USP47-205ENST00000525257 PUS10Q3MIT2 529 aaKnown RBP27.54■■■□□ 2
USP47-205ENST00000525257 CASC1Q6TDU7 716 aa27.54■■■□□ 2
USP47-205ENST00000525257 CMTR1Q8N1G2 835 aaKnown RBP27.54■■■□□ 2
USP47-205ENST00000525257 MAP4K1Q92918 833 aa27.54■■■□□ 2
USP47-205ENST00000525257 GPRASP2Q96D09 838 aa27.54■■■□□ 2
USP47-205ENST00000525257 PABPC5Q96DU9 382 aaKnown RBP27.54■■■□□ 2
USP47-205ENST00000525257 PKD2L1Q9P0L9 805 aa27.54■■■□□ 2
USP47-205ENST00000525257 PRC1O43663 620 aa27.53■■■□□ 2
USP47-205ENST00000525257 SMARCA1P28370 1054 aa27.53■■■□□ 2
USP47-205ENST00000525257 MGAT3Q09327 533 aa27.53■■■□□ 2
USP47-205ENST00000525257 LPIN1Q14693 890 aa27.53■■■□□ 2
USP47-205ENST00000525257 TAF2Q6P1X5 1199 aa27.53■■■□□ 2
USP47-205ENST00000525257 NFXL1Q6ZNB6 911 aa27.53■■■□□ 2
USP47-205ENST00000525257 SRBD1Q8N5C6 995 aaKnown RBP27.53■■■□□ 2
USP47-205ENST00000525257 LZTS2Q9BRK4 669 aa27.53■■■□□ 2
USP47-205ENST00000525257 TUBE1Q9UJT0 475 aa27.53■■■□□ 2
USP47-205ENST00000525257 GSTTP1A0A1W2PQM5 241 aa27.52■■■□□ 2
USP47-205ENST00000525257 RXRAP19793 462 aa27.52■■■□□ 2
USP47-205ENST00000525257 HOXD11P31277 338 aaPredicted RBP27.52■■■□□ 2
USP47-205ENST00000525257 GRIK4Q16099 956 aa27.52■■■□□ 2
USP47-205ENST00000525257 RPAINQ86UA6 219 aa27.52■■■□□ 2
USP47-205ENST00000525257 RSPH3Q86UC2 560 aa27.52■■■□□ 2
USP47-205ENST00000525257 SEPT1Q8WYJ6 367 aa27.52■■■□□ 2
USP47-205ENST00000525257 CDHR1Q96JP9 859 aa27.52■■■□□ 2
USP47-205ENST00000525257 PSTPIP2Q9H939 334 aa27.52■■■□□ 2
USP47-205ENST00000525257 EHMT1Q9H9B1 1298 aa27.52■■■□□ 2
USP47-205ENST00000525257 CLDND1Q9NY35 253 aa27.52■■■□□ 2
USP47-205ENST00000525257 ADGRA3Q8IWK6 1321 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 ITGB5P18084 799 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 GNAQP50148 359 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 UBE2SQ16763 222 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 DNAJB3Q8WWF6 145 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 GLG1Q92896 1179 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 ERAP1Q9NZ08 941 aa27.51■■□□□ 1.99
USP47-205ENST00000525257 hCG_1642624A0A1W2PR95 340 aa27.5■■□□□ 1.99
USP47-205ENST00000525257 CCDC69A6NI79 296 aa27.5■■□□□ 1.99
USP47-205ENST00000525257 SH2B2O14492 632 aaPredicted RBP27.5■■□□□ 1.99
USP47-205ENST00000525257 MTMR1Q13613 665 aa27.5■■□□□ 1.99
USP47-205ENST00000525257 COL19A1Q14993 1142 aa27.5■■□□□ 1.99
USP47-205ENST00000525257 RAB11FIP4Q86YS3 637 aa27.5■■□□□ 1.99
USP47-205ENST00000525257 C5orf67F2Z3F1 127 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 LINC00271P0C7V0 271 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 BMPR1AP36894 532 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 IGBP1P78318 339 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 COL9A3Q14050 684 aaPredicted RBP27.49■■□□□ 1.99
USP47-205ENST00000525257 FBXO47Q5MNV8 452 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 MARCH8Q5T0T0 291 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 ZBTB10Q96DT7 871 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 C11orf84Q9BUA3 381 aaPredicted RBP27.49■■□□□ 1.99
USP47-205ENST00000525257 RC3H2Q9HBD1 1191 aaKnown RBP27.49■■□□□ 1.99
USP47-205ENST00000525257 UBIAD1Q9Y5Z9 338 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 CDY2AQ9Y6F7 541 aa27.49■■□□□ 1.99
USP47-205ENST00000525257 PRR33A8MZF0 331 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 ENPP3O14638 875 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 GRM6O15303 877 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 CSPG5O95196 566 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms