RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 LILRB1Q8NHL6 650 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 CPLX3Q8WVH0 158 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 YME1L1Q96TA2 773 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 C8orf33Q9H7E9 229 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 PREBQ9HCU5 417 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 VANGL2Q9ULK5 521 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 C15orf41Q9Y2V0 281 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 CARMIL1Q5VZK9 1371 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 MYO1FO00160 1098 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 TMCC2O75069 709 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 MYCP01106 439 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 HLA-DRAP01903 254 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 CYP1A2P05177 515 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 FYNP06241 537 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 ATP2A2P16615 1042 aaKnown RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 ARF4P18085 180 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 MAPKAPK2P49137 400 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 THOP1P52888 689 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 PHEXP78562 749 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 TRPC3Q13507 836 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 TRIM25Q14258 630 aaKnown RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 PTK2BQ14289 1009 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 RGS9BPQ6ZS82 235 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 RFX8Q6ZV50 586 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 GPIHBP1Q8IV16 184 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 RNASE11Q8TAA1 199 aaKnown RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 SH3TC2Q8TF17 1288 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 ZNF512BQ96KM6 892 aaPredicted RBP7.47□□□□□ -1.21
LIN7C-202ENST00000524596 GMIPQ9P107 970 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 MTRRQ9UBK8 725 aa7.47□□□□□ -1.21
LIN7C-202ENST00000524596 SCRIBQ14160 1630 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 WDR33Q9C0J8 1336 aaKnown RBP7.46□□□□□ -1.21
LIN7C-202ENST00000524596 PRMT3O60678 531 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 HOXD10P28358 340 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 PRKAR2BP31323 418 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 KRT2P35908 639 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 RECQLP46063 649 aaPredicted RBP7.46□□□□□ -1.21
LIN7C-202ENST00000524596 NLRP12P59046 1061 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 RPP38P78345 283 aaKnown RBP7.46□□□□□ -1.21
LIN7C-202ENST00000524596 SPAG1Q07617 926 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 TCEAL1Q15170 157 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 WDR44Q5JSH3 913 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 KCTD16Q68DU8 428 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 RASSF3Q86WH2 238 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 MOGAT1Q96PD6 335 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 VPS11Q9H270 941 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 PLEKHA4Q9H4M7 779 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 TRPC7Q9HCX4 862 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 MAD1L1Q9Y6D9 718 aa7.46□□□□□ -1.21
LIN7C-202ENST00000524596 FSBPO95073 299 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 VAMP1P23763 118 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 SSTP61278 116 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 STK11Q15831 433 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 C8orf34Q49A92 452 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 DGKKQ5KSL6 1271 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 DEPDC1Q5TB30 811 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 IYDQ6PHW0 289 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 UNC45BQ8IWX7 931 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 PM20D2Q8IYS1 436 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 E2F7Q96AV8 911 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 RBM14Q96PK6 669 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 DNAJC17Q9NVM6 304 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 DLGAP2Q9P1A6 1054 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 SRP68Q9UHB9 627 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 PACSIN2Q9UNF0 486 aaPredicted RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 ARL2BPQ9Y2Y0 163 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 SAMM50Q9Y512 469 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 IFRD1O00458 451 aaPredicted RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 RASSF2P50749 326 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 CKAP4Q07065 602 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 KLHL30Q0D2K2 578 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 TRAP1Q12931 704 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 PRR16Q569H4 304 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 TERB1Q8NA31 727 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 CCDC12Q8WUD4 166 aaPredicted RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 KCTD4Q8WVF5 259 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 CGREF1Q99674 301 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 NUP62CLQ9H1M0 184 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 CLIC5Q9NZA1 410 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 ORC3Q9UBD5 711 aaPredicted RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 SPATA2Q9UM82 520 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 APOBEC2Q9Y235 224 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 COMMD3-BMI1R4GMX3 469 aa7.46□□□□□ -1.22
LIN7C-202ENST00000524596 THOC2Q8NI27 1593 aaKnown RBP7.46□□□□□ -1.22
LIN7C-202ENST00000524596 HGSO14964 777 aaPredicted RBP7.45□□□□□ -1.22
LIN7C-202ENST00000524596 ENO2P09104 434 aaPredicted RBP7.45□□□□□ -1.22
LIN7C-202ENST00000524596 ATP5JP18859 108 aa7.45□□□□□ -1.22
LIN7C-202ENST00000524596 ADCY8P40145 1251 aa7.45□□□□□ -1.22
LIN7C-202ENST00000524596 PPP1R2P41236 205 aa7.45□□□□□ -1.22
LIN7C-202ENST00000524596 TDRD12Q587J7 1177 aaKnown RBP7.45□□□□□ -1.22
LIN7C-202ENST00000524596 PPP1R2P3Q6NXS1 205 aa7.45□□□□□ -1.22
LIN7C-202ENST00000524596 AFAP1L2Q8N4X5 818 aa7.45□□□□□ -1.22
LIN7C-202ENST00000524596 MINDY2Q8NBR6 621 aa7.45□□□□□ -1.22
LIN7C-202ENST00000524596 NPLOC4Q8TAT6 608 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms