RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 GPTP24298 496 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 ANXA13P27216 316 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 SERPINB3P29508 390 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 HAAOP46952 286 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 KCNC4Q03721 635 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 CACNB2Q08289 660 aaPredicted RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 CBX3Q13185 183 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 MTX1Q13505 466 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 ELF2Q15723 593 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 SUPT20HL1Q3ZLR7 823 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 TMEM53Q6P2H8 277 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 DRICH1Q6PGQ1 229 aaPredicted RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 C1orf228Q6PIY5 440 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 ZNF600Q6ZNG1 722 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 PPP1R42Q7Z4L9 355 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 CABP7Q86V35 215 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 SIX5Q8N196 739 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 PCSK9Q8NBP7 692 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 NAXEQ8NCW5 288 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 SUPT20HQ8NEM7 779 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 SMARCC2Q8TAQ2 1214 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 NPLOC4Q8TAT6 608 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 ART5Q96L15 291 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 PPM1MQ96MI6 270 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 NR1H4Q96RI1 486 aaPredicted RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 EIF3CQ99613 913 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 GAL3ST1Q99999 423 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 PARD6BQ9BYG5 372 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 API5Q9BZZ5 524 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 MROH8Q9H579 483 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 PARVBQ9HBI1 364 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 DDX18Q9NVP1 670 aaKnown RBP7.15□□□□□ -1.26
SDC2-208ENST00000523877 MBD2Q9UBB5 411 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 HESX1Q9UBX0 185 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 CIDEBQ9UHD4 219 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 ZNF112Q9UJU3 913 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 L1RE1Q9UN81 338 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 TMEM5Q9Y2B1 443 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 PCDHB2Q9Y5E7 798 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 MYPNQ86TC9 1320 aa7.15□□□□□ -1.26
SDC2-208ENST00000523877 SPATA31D1Q6ZQQ2 1576 aa7.15□□□□□ -1.27
SDC2-208ENST00000523877 A0A0G2JPF8 293 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 CCDC69A6NI79 296 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 HNRNPCL3B7ZW38 293 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 F8W031 263 aaPredicted RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 UBXN8O00124 270 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 AP3B1O00203 1094 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 RNF113AO15541 343 aaKnown RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 IDH3BO43837 385 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 CBFA2T3O75081 653 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 ZC3H11AO75152 810 aaKnown RBP eCLIP7.14□□□□□ -1.27
SDC2-208ENST00000523877 RPS6KA5O75582 802 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 PALMO75781 387 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 URI1O94763 535 aaPredicted RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 PNMA6AP0CW24 399 aaPredicted RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 THEGLP0DJG4 465 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 HNRNPCL4P0DMR1 293 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 CKBP12277 381 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 ARF4P18085 180 aaPredicted RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 CAPN3P20807 821 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 IL10P22301 178 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 PMLP29590 882 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 KCNJ6P48051 423 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 SULT1E1P49888 294 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 GBE1Q04446 702 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 PPP2R3AQ06190 1150 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 STK38Q15208 465 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 CRY1Q16526 586 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 LETM2Q2VYF4 491 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 C5orf22Q49AR2 442 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 CFAP221Q4G0U5 840 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 MAP3K19Q56UN5 1328 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 AADACL4Q5VUY2 407 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 CAVIN1Q6NZI2 390 aaKnown RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 KLC3Q6P597 504 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 C11orf88Q6PI97 169 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 C4orf50Q6ZRC1 276 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 LPCAT2Q7L5N7 544 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 BRAPQ7Z569 592 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 MRPL10Q7Z7H8 261 aaKnown RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 LUZP1Q86V48 1076 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 C7orf31Q8N865 590 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 MAB21L3Q8N8X9 362 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 ANKRD53Q8N9V6 530 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 GOLM1Q8NBJ4 401 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 NFATC2IPQ8NCF5 419 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 IL17REQ8NFR9 667 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 RUFY2Q8WXA3 655 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 LPIN2Q92539 896 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 SGK3Q96BR1 496 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 INTS12Q96CB8 462 aaKnown RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 RPGRIP1Q96KN7 1286 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 MAP3K5Q99683 1374 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 RIOK1Q9BRS2 568 aaKnown RBP7.14□□□□□ -1.27
SDC2-208ENST00000523877 GBP3Q9H0R5 595 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 EHD1Q9H4M9 534 aa7.14□□□□□ -1.27
SDC2-208ENST00000523877 ZWILCHQ9H900 591 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms