RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 VPS37CA5D8V6 355 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-224ENST00000523873 HAS3O00219 553 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 CHMP2AO43633 222 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 PPFIA4O75335 1185 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 F2P00734 622 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 U2AF2P26368 475 aaKnown RBP eCLIP14.52□□□□□ -0.092e-48■□□□□ 11.2
VEGFA-224ENST00000523873 KIAA0753Q2KHM9 967 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 PPP4R3AQ6IN85 833 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 SH3RF1Q7Z6J0 888 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 NOSTRINQ8IVI9 506 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 SLC43A3Q8NBI5 491 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 ETNPPLQ8TBG4 499 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 SEPT1Q8WYJ6 367 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 TEKT3Q9BXF9 490 aa14.52□□□□□ -0.09
VEGFA-224ENST00000523873 PRDM5Q9NQX1 630 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-224ENST00000523873 TANC1Q9C0D5 1861 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 GCFC2P16383 781 aaKnown RBP14.51□□□□□ -0.09
VEGFA-224ENST00000523873 MARK3P27448 753 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 MCM7P33993 719 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 ZNF174Q15697 407 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 C1orf53Q5VUE5 145 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 LRCH2Q5VUJ6 765 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 FAM126BQ8IXS8 530 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 HAS1Q92839 578 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 TRPV6Q9H1D0 765 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 UNC45AQ9H3U1 944 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 KCNMB3Q9NPA1 279 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 PDLIM7Q9NR12 457 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 TBC1D22BQ9NU19 505 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 TRMT13Q9NUP7 481 aaKnown RBP14.51□□□□□ -0.09
VEGFA-224ENST00000523873 HDAC6Q9UBN7 1215 aa14.51□□□□□ -0.09
VEGFA-224ENST00000523873 ARID2Q68CP9 1835 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 H0YGN5 161 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 H3BRB1 525 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 RBAK-RBAKDNI3L0D1 243 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 B4GALT4O60513 344 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 GAS7O60861 476 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 LGR5O75473 907 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 PSMD10O75832 226 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
VEGFA-224ENST00000523873 SYT1P21579 422 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 TOB1P50616 345 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-224ENST00000523873 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-224ENST00000523873 FAAP100Q0VG06 881 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 HIC1Q14526 733 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 TTC38Q5R3I4 469 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 ABHD15Q6UXT9 468 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 FERMT3Q86UX7 667 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 CCDC60Q8IWA6 550 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-224ENST00000523873 NAP1L4Q99733 375 aaKnown RBP14.5□□□□□ -0.09
VEGFA-224ENST00000523873 TMEM60Q9H2L4 133 aa14.5□□□□□ -0.09
VEGFA-224ENST00000523873 TUT1Q9H6E5 874 aaKnown RBP14.5□□□□□ -0.09
VEGFA-224ENST00000523873 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 DCDC2CA8MYV0 355 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 TNRC18O15417 2968 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-224ENST00000523873 MARCH6O60337 910 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 ATG7O95352 703 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 CD4P01730 458 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 CLTBP09497 229 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 SUPT20HL2P0C7V6 817 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 CALCRLQ16602 461 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 GDF6Q6KF10 455 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-224ENST00000523873 ZNF746Q6NUN9 644 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-224ENST00000523873 ANKRD33Q7Z3H0 272 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 GLG1Q92896 1179 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 TRIM43Q96BQ3 446 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-224ENST00000523873 RIT2Q99578 217 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 KATNAL1Q9BW62 490 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 RNPEPQ9H4A4 650 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 NOL7Q9UMY1 257 aaKnown RBP14.49□□□□□ -0.09
VEGFA-224ENST00000523873 SAMM50Q9Y512 469 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 SIP14410 1827 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 TCHHQ07283 1943 aa14.49□□□□□ -0.09
VEGFA-224ENST00000523873 MROH7Q68CQ1 1323 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 EMSYQ7Z589 1322 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 EML1O00423 815 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 BACH1O14867 736 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 NEMFO60524 1076 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 SMIM10L2AP0DMW4 78 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 SMIM10L2BP0DMW5 78 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 CYP2C9P11712 490 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 ITGB8P26012 769 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 KRT76Q01546 638 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 SWSAP1Q6NVH7 229 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 MIS18BP1Q6P0N0 1132 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 NFRKBQ6P4R8 1299 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 TRMT1LQ7Z2T5 733 aaKnown RBP14.48□□□□□ -0.09
VEGFA-224ENST00000523873 C7orf31Q8N865 590 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 PPP1R12CQ9BZL4 782 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 SMARCAD1Q9H4L7 1026 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 ZNF302Q9NR11 478 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 TMEM39AQ9NV64 488 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 GTF2IRD1Q9UHL9 959 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 TCEAL9Q9UHQ7 104 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 VAV3Q9UKW4 847 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 ZNF215Q9UL58 517 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-224ENST00000523873 PCDHB6Q9Y5E3 794 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 NR2E3Q9Y5X4 410 aa14.48□□□□□ -0.09
VEGFA-224ENST00000523873 IGKV6D-21A0A0A0MT36 114 aa14.47□□□□□ -0.09
VEGFA-224ENST00000523873 WDR64B1ANS9 1081 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms