RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ELNP15502 786 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 MARK3P27448 753 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 PDIA5Q14554 519 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 KCNK18Q7Z418 384 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
SDCBP-212ENST00000523483 ADGRA2Q96PE1 1338 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 PSMC6P62333 389 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 PLCB2Q00722 1185 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 TTLL4Q14679 1199 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 POSTNQ15063 836 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 SWSAP1Q6NVH7 229 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 RIT2Q99578 217 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 ANP32EQ9BTT0 268 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 DNAH12Q6ZR08 3092 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
SDCBP-212ENST00000523483 CCNE2O96020 404 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 SPIRE1Q08AE8 756 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 GRB10Q13322 594 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 GLG1Q92896 1179 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 BHMT2Q9H2M3 363 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 FLRT1Q9NZU1 646 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 GABBR1Q9UBS5 961 aa10.46□□□□□ -0.73
SDCBP-212ENST00000523483 FRMPD4Q14CM0 1322 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.46□□□□□ -0.74
SDCBP-212ENST00000523483 WDR64B1ANS9 1081 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 GPR25O00155 361 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 SLFN14P0C7P3 912 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 KCNA2P16389 499 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 ASIC1P78348 528 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 TRIM50Q86XT4 487 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 ABRAQ8N0Z2 381 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 SCFD2Q8WU76 684 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 LARP4BQ92615 738 aaKnown RBP10.46□□□□□ -0.74
SDCBP-212ENST00000523483 SPATA33Q96N06 139 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 CCSER1Q9C0I3 900 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 DNM3Q9UQ16 869 aa10.46□□□□□ -0.74
SDCBP-212ENST00000523483 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 DHX15O43143 795 aaKnown RBP10.45□□□□□ -0.74
SDCBP-212ENST00000523483 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
SDCBP-212ENST00000523483 ACTR2P61160 394 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 CUL4BQ13620 913 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 SV2BQ7L1I2 683 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 LRRC15Q8TF66 581 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 SOCS4Q8WXH5 440 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 SMARCE1Q969G3 411 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 PAGE5Q96GU1 130 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 PNMA5Q96PV4 448 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 MAPK8IP1Q9UQF2 711 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 PCDHA5Q9Y5H7 936 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 STAM2O75886 525 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 SNAI1O95863 264 aaPredicted RBP10.45□□□□□ -0.74
SDCBP-212ENST00000523483 EDNRBP24530 442 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 CAP1Q01518 475 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 KRT76Q01546 638 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 ACVR2BQ13705 512 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 CCDC144BQ3MJ40 725 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 HSDL1Q3SXM5 330 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 NAALADL2Q58DX5 795 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 NIPA1Q7RTP0 329 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 RAET1EQ8TD07 263 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 PPP1R13LQ8WUF5 828 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 ZNF296Q8WUU4 475 aaPredicted RBP10.45□□□□□ -0.74
SDCBP-212ENST00000523483 NT5C3AQ9H0P0 336 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 KDM3AQ9Y4C1 1321 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 MAFGO15525 162 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 PPP2R5CQ13362 524 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 NEDD9Q14511 834 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 APBA2Q99767 749 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 PCDHA10Q9Y5I2 948 aa10.45□□□□□ -0.74
SDCBP-212ENST00000523483 SLITRK3O94933 977 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 CCDC192P0DO97 292 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 UGCGQ16739 394 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 MORN1Q5T089 497 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 L1TD1Q5T7N2 865 aaKnown RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 SMYD4Q8IYR2 804 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 ABHD16BQ9H3Z7 469 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 TBC1D7Q9P0N9 293 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 WRAP73Q9P2S5 460 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 TRIM17Q9Y577 477 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 NPHP3-ACAD11A0A0J9YXS1 232 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 CTAGE5O15320 804 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 DYNC1LI2O43237 492 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 PLA2G4BP0C869 781 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 SPATA31C1P0DKV0 1188 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 RPA1P27694 616 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 PLA2G4FQ68DD2 849 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 PDXDC2PQ6P474 469 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 CCDC60Q8IWA6 550 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 DNAJC25Q9H1X3 360 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 AZI2Q9H6S1 392 aa10.44□□□□□ -0.74
SDCBP-212ENST00000523483 SEPT9Q9UHD8 586 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 TCF7P36402 384 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-212ENST00000523483 QARSP47897 775 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms