RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SREBF1P36956 1147 aa21.36■■□□□ 1.01
SPIDR-220ENST00000522900 ADAM17P78536 824 aa21.36■■□□□ 1.01
SPIDR-220ENST00000522900 ERICH6BQ5W0A0 696 aa21.36■■□□□ 1.01
SPIDR-220ENST00000522900 TEX2Q8IWB9 1127 aa21.36■■□□□ 1.01
SPIDR-220ENST00000522900 OSBPL7Q9BZF2 842 aa21.36■■□□□ 1.01
SPIDR-220ENST00000522900 UPF3BQ9BZI7 483 aaKnown RBP21.36■■□□□ 1.01
SPIDR-220ENST00000522900 ZNF215Q9UL58 517 aaPredicted RBP21.36■■□□□ 1.01
SPIDR-220ENST00000522900 DOCK5Q9H7D0 1870 aa21.36■■□□□ 1.01
SPIDR-220ENST00000522900 MEIS1O00470 390 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 AP3B2Q13367 1082 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 CEP55Q53EZ4 464 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 TMCO2Q7Z6W1 182 aaPredicted RBP21.35■■□□□ 1.01
SPIDR-220ENST00000522900 PCYT2Q99447 389 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 SLC26A6Q9BXS9 759 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 ZMYND12Q9H0C1 365 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 GLT8D2Q9H1C3 349 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 CYP46A1Q9Y6A2 500 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 TANC1Q9C0D5 1861 aa21.35■■□□□ 1.01
SPIDR-220ENST00000522900 TRIP12Q14669 1992 aaPredicted RBP21.34■■□□□ 1.01
SPIDR-220ENST00000522900 RSPH10B2B2RC85 870 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 BAIAP3O94812 1187 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 PARNO95453 639 aaKnown RBP21.34■■□□□ 1.01
SPIDR-220ENST00000522900 RSPH10BP0C881 870 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 IFNAR1P17181 557 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 MARK3P27448 753 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 ARHGAP4P98171 946 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 ITGB3BPQ13352 177 aaPredicted RBP21.34■■□□□ 1.01
SPIDR-220ENST00000522900 CNKSR3Q6P9H4 555 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 HERC6Q8IVU3 1022 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 PHOSPHO2Q8TCD6 241 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 LMBR1Q8WVP7 490 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 SLC9A7Q96T83 725 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 TM6SF1Q9BZW5 370 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 AGO4Q9HCK5 861 aaKnown RBP21.34■■□□□ 1.01
SPIDR-220ENST00000522900 TET1Q8NFU7 2136 aa21.34■■□□□ 1.01
SPIDR-220ENST00000522900 ESYT2A0FGR8 921 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 FAM86B1E9PN63 330 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 ARHGEF15O94989 841 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 CA3P07451 260 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 FAM86B2P0C5J1 330 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 WDR5P61964 334 aaKnown RBP21.33■■□□□ 1.01
SPIDR-220ENST00000522900 DEFB103AP81534 67 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 ADGRE1Q14246 886 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 GLG1Q92896 1179 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 UIMC1Q96RL1 719 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 JPH1Q9HDC5 661 aaPredicted RBP21.33■■□□□ 1.01
SPIDR-220ENST00000522900 SLC9A2Q9UBY0 812 aa21.33■■□□□ 1.01
SPIDR-220ENST00000522900 EYSQ5T1H1 3165 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 A0A0C4DFX4 3053 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 GNAT1P11488 350 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 ZNF76P36508 570 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 AKAP17AQ02040 695 aaKnown RBP21.32■■□□□ 1
SPIDR-220ENST00000522900 PPP2R2DQ66LE6 453 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 RUFY4Q6ZNE9 571 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 CRYGNQ8WXF5 182 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 RNF26Q9BY78 433 aaPredicted RBP21.32■■□□□ 1
SPIDR-220ENST00000522900 C6orf50Q9HD87 102 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 ERAP1Q9NZ08 941 aa21.32■■□□□ 1
SPIDR-220ENST00000522900 NRCAMQ92823 1304 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 LGR5O75473 907 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 CTSHP09668 335 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 KCNJ6P48051 423 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 ACTR2P61160 394 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 STK3Q13188 491 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.31■■□□□ 1
SPIDR-220ENST00000522900 USP38Q8NB14 1042 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 DBF4BQ8NFT6 615 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 RASGRP4Q8TDF6 673 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 ZBTB10Q96DT7 871 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 SDF4Q9BRK5 362 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 SMARCAD1Q9H4L7 1026 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 PDRG1Q9NUG6 133 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 VPS54Q9P1Q0 977 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 CHD7Q9P2D1 2997 aa21.31■■□□□ 1
SPIDR-220ENST00000522900 NFASCO94856 1347 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 IGLV3-22A0A075B6J6 115 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 ABHD14A-ACY1A0A1B0GW23 586 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 CYP3A4P08684 503 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 IKBKEQ14164 716 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 MARCH8Q5T0T0 291 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 PLA2G4DQ86XP0 818 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 CCDC12Q8WUD4 166 aaPredicted RBP21.3■■□□□ 1
SPIDR-220ENST00000522900 ZNF274Q96GC6 653 aaPredicted RBP21.3■■□□□ 1
SPIDR-220ENST00000522900 GAS2L1Q99501 681 aaPredicted RBP21.3■■□□□ 1
SPIDR-220ENST00000522900 CERS4Q9HA82 394 aa21.3■■□□□ 1
SPIDR-220ENST00000522900 GBF1Q92538 1859 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 DDX39AO00148 427 aaKnown RBP21.29■■□□□ 1
SPIDR-220ENST00000522900 RFXAPO00287 272 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 CCNE2O96020 404 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 PPFIA1Q13136 1202 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 GRIK4Q16099 956 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.29■■□□□ 1
SPIDR-220ENST00000522900 NIPA1Q7RTP0 329 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 REXO1Q8N1G1 1221 aaKnown RBP21.29■■□□□ 1
SPIDR-220ENST00000522900 CDH23Q9H251 3354 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 EMSYQ7Z589 1322 aa21.29■■□□□ 1
SPIDR-220ENST00000522900 LCHNA4D1U4 455 aa21.28■■□□□ 1
SPIDR-220ENST00000522900 DHX15O43143 795 aaKnown RBP21.28■■□□□ 1
SPIDR-220ENST00000522900 EDIL3O43854 480 aa21.28■■□□□ 1
SPIDR-220ENST00000522900 TLL1O43897 1013 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms