RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 CCDC65Q8IXS2 484 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 TRIM58Q8NG06 486 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 BCAS3Q9H6U6 928 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 ECE2O60344 883 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 TLR2O60603 784 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 HOXA13P31271 388 aaPredicted RBP18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 PDE6BP35913 854 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 CASP5P51878 434 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 POLR2FP61218 127 aaKnown RBP18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 GPS2Q13227 327 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 IQCDQ96DY2 449 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 EHD4Q9H223 541 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 TDRD3Q9H7E2 651 aaKnown RBP18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 EMILIN3Q9NT22 766 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 JRKLQ9Y4A0 524 aa18.01■□□□□ 0.47
SMG1P3-206ENST00000522841 F5H6K3 240 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 LCA5LO95447 670 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 KLRC3Q07444 240 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 ASTE1Q2TB18 679 aaPredicted RBP18■□□□□ 0.47
SMG1P3-206ENST00000522841 FAM83BQ5T0W9 1011 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 SLC30A10Q6XR72 485 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 HDAC7Q8WUI4 952 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 RRP15Q9Y3B9 282 aaKnown RBP18■□□□□ 0.47
SMG1P3-206ENST00000522841 KDM3AQ9Y4C1 1321 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 ARHGAP4P98171 946 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 PABPC4Q13310 644 aaKnown RBP eCLIP18■□□□□ 0.47
SMG1P3-206ENST00000522841 SRLQ86TD4 932 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 CATSPER3Q86XQ3 398 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 TEX2Q8IWB9 1127 aa18■□□□□ 0.47
SMG1P3-206ENST00000522841 TUBBP07437 444 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 USP11P51784 963 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 NAP1L1P55209 391 aaKnown RBP17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 ADAM9Q13443 819 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 DCAF4Q8WV16 495 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 KCTD10Q9H3F6 313 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 ANKRD65E5RJM6 399 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 NDUFB10O96000 172 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 SLC12A3P55017 1021 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 DACT2Q5SW24 774 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 PODNQ7Z5L7 613 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 CYP2W1Q8TAV3 490 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 MKL1Q969V6 931 aa17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMG1P3-206ENST00000522841 DNA2P51530 1060 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 CYP4A11Q02928 519 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 ABCB5Q2M3G0 1257 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 OSBPL9Q96SU4 736 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 DHX36Q9H2U1 1008 aaKnown RBP17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 NYAP2Q9P242 653 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 FAM86B1E9PN63 330 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 GH2P01242 217 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 FAM86B2P0C5J1 330 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 CHRNA5P30532 468 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 SPIRE1Q08AE8 756 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 AOC3Q16853 763 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 SFMBT2Q5VUG0 894 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 FOXR1Q6PIV2 292 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 TRIM59Q8IWR1 403 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 RIN2Q8WYP3 895 aaPredicted RBP17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 RPGRIP1Q96KN7 1286 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 LRRC1Q9BTT6 524 aa17.98■□□□□ 0.47
SMG1P3-206ENST00000522841 SLC7A5Q01650 507 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 RRP1BQ14684 758 aaKnown RBP17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 ETNPPLQ8TBG4 499 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 EXOC4Q96A65 974 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 CEP72Q9P209 647 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 DMGDHQ9UI17 866 aaKnown RBP17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 UTRNP46939 3433 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 APBA3O96018 575 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 CYP3A7P24462 503 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 FBXO11Q86XK2 927 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
SMG1P3-206ENST00000522841 TARSL2A2RTX5 802 aaKnown RBP17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 SPATA31C1P0DKV0 1188 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 ACTN1P12814 892 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 RAPGEF1Q13905 1077 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 HSP90B2PQ58FF3 399 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 TBC1D5Q92609 795 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 LENG9Q96B70 501 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 MS4A14Q96JA4 679 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 CEP63Q96MT8 703 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■■□□□ 12.6
SMG1P3-206ENST00000522841 RSPH10B2B2RC85 870 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 PRPF6O94906 941 aaKnown RBP17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 RSPH10BP0C881 870 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 GIT2Q14161 759 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 SLC9C1Q4G0N8 1177 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 STRIP1Q5VSL9 837 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 ICE2Q659A1 982 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 FAM133AQ8N9E0 248 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 SPATA4Q8NEY3 305 aa17.96■□□□□ 0.47
SMG1P3-206ENST00000522841 CRYGNQ8WXF5 182 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms