RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 BTNL9Q6UXG8 535 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ACER1Q8TDN7 264 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CEP63Q96MT8 703 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 POLD4Q9HCU8 107 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 AKR1B10O60218 316 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 LCA5LO95447 670 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RPA1P27694 616 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 HGSNATQ68CP4 663 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 LSM14BQ9BX40 385 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SH2D4AQ9H788 454 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 VAV3Q9UKW4 847 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MYH10P35580 1976 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TBX3O15119 743 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SLC26A4O43511 780 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TLR2O60603 784 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MOCS3O95396 460 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TUBB4BP68371 445 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 GFPT1Q06210 699 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ASTE1Q2TB18 679 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SFR1Q86XK3 245 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TBC1D5Q92609 795 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ANO9A1A5B4 782 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 H3BQF6 201 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 EML1O00423 815 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 C21orf2O43822 256 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CIITAP33076 1130 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ADAM9Q13443 819 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ZC3H3Q8IXZ2 948 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ERMNQ8TAM6 284 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TSGA10Q9BZW7 698 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 L1RE1Q9UN81 338 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 DNM3Q9UQ16 869 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 HOXD13P35453 343 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MARSP56192 900 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 POLR2FP61218 127 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 FAM83BQ5T0W9 1011 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CDAN1Q8IWY9 1227 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ANKRD13CQ8N6S4 541 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 JADE2Q9NQC1 790 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RGL1Q9NZL6 768 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CEP72Q9P209 647 aa11.88□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MYBP10242 640 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 USP14P54578 494 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MCTP2Q6DN12 878 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 EDEM3Q9BZQ6 932 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 COL2A1P02458 1487 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 IGLV3-22A0A075B6J6 115 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ERLIN1O75477 346 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 GNA14O95837 355 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 NR2F2P24468 414 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ZNF76P36508 570 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MAGEA1P43355 309 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RUSC1Q9BVN2 902 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 BHMT2Q9H2M3 363 aa11.87□□□□□ -0.51
RAB11FIP1-204ENST00000522774 PRPF6O94906 941 aaKnown RBP11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CFBP00751 764 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 POLD1P28340 1107 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 STAT2P52630 851 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TRIM58Q8NG06 486 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 EIF2AK1Q9BQI3 630 aaKnown RBP11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TACC1O75410 805 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RAD17O75943 681 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 KIF20AO95235 890 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CYP3A4P08684 503 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 UBXN2AP68543 259 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 RASSF7Q02833 373 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 EDRF1Q3B7T1 1238 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 WDR93Q6P2C0 686 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 HDXQ7Z353 690 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 PDE11AQ9HCR9 933 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SNX12Q9UMY4 172 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 JRKLQ9Y4A0 524 aa11.86□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms