RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PCBP1Q15365 356 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 TRAF6Q9Y4K3 522 aa6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 PHLDB1Q86UU1 1377 aa6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 CRTAMO95727 393 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 CKMP06732 381 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 MECP2P51608 486 aaKnown RBP6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 CAP1Q01518 475 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 DLX2Q07687 328 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 ZCCHC8Q6NZY4 707 aaKnown RBP6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 CD300LDQ6UXZ3 194 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 ETV3LQ6ZN32 361 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 SAPCD2Q86UD0 394 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 STK32CQ86UX6 486 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 ZDHHC14Q8IZN3 488 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 UBR7Q8N806 425 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 XYLT2Q9H1B5 865 aa6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 SPATA6Q9NWH7 488 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 THRAP3Q9Y2W1 955 aaKnown RBP6.56□□□□□ -1.36
HMGB1P1-201ENST00000522557 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 AQP7O14520 342 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 HGSO14964 777 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 TADA3O75528 432 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 PARNO95453 639 aaKnown RBP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 STAT5AP42229 794 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 SLURP1P55000 103 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 GPR85P60893 370 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 EXOSC10Q01780 885 aaKnown RBP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 SMAD4Q13485 552 aaKnown RBP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 STEAP3Q658P3 488 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 LILRA6Q6PI73 481 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 KIF18BQ86Y91 864 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 MIB1Q86YT6 1006 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 ARRDC4Q8NCT1 418 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 ZBTB8AQ96BR9 441 aa6.55□□□□□ -1.36
HMGB1P1-201ENST00000522557 TCRBV5S2A0A599 114 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 DGKIO75912 1065 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 SASH1O94885 1247 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 CYP2C8P10632 490 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 CREB3L3Q68CJ9 461 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 LBX2Q6XYB7 198 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 LHFPL2Q6ZUX7 228 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 NECAB2Q7Z6G3 386 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 FAM126BQ8IXS8 530 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 HOMER2Q9NSB8 354 aa6.54□□□□□ -1.36
HMGB1P1-201ENST00000522557 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 SH3D21A4FU49 640 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 ALG1L2C9J202 215 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 CBX4O00257 560 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 GPR39O43194 453 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 EVA1CP58658 441 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 NFKB2Q00653 900 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 DSG1Q02413 1049 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 CR1LQ2VPA4 569 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 EMC4Q5J8M3 183 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 CNNM4Q6P4Q7 775 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 LIPIQ6XZB0 460 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 AHI1Q8N157 1196 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 LINC00482Q8N8I6 264 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 PCDH19Q8TAB3 1148 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 MAGEB10Q96LZ2 347 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 KCNJ15Q99712 375 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 C11orf84Q9BUA3 381 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 CELF4Q9BZC1 486 aaKnown RBP6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 EPB41L1Q9H4G0 881 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 LUC7LQ9NQ29 371 aaKnown RBP6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 RAPGEFL1Q9UHV5 662 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 MCM8Q9UJA3 840 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 ZNF652Q9Y2D9 606 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 PCDHA9Q9Y5H5 950 aa6.53□□□□□ -1.36
HMGB1P1-201ENST00000522557 WASHC2CQ9Y4E1 1318 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 B4E1Z4 1266 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 OPA1O60313 960 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 MARCH6O60337 910 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 GLRX3O76003 335 aaKnown RBP6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 JMJD7P0C870 316 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 COL6A2P12110 1019 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 NAT1P18440 290 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 KCNC1P48547 511 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 CTSWP56202 376 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 CHRNA2Q15822 529 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 CDCA2Q69YH5 1023 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 RBM12BQ8IXT5 1001 aaKnown RBP6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 IFNL3Q8IZI9 196 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 PIP4K2CQ8TBX8 421 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 PCDHB4Q9Y5E5 795 aa6.52□□□□□ -1.37
HMGB1P1-201ENST00000522557 K7ESF4 209 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 TRAF5O00463 557 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 CNGA1P29973 690 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 HABP4Q5JVS0 413 aaKnown RBP6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 CARFQ8N187 725 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 YIPF4Q9BSR8 244 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms