RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 A0A1B0GTH6 734 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 POTEFA5A3E0 1075 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 NRDCO43847 1150 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 FCER1AP12319 257 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 EEF1GP26641 437 aaKnown RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 SFNP31947 248 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 CLCN1P35523 988 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 PSMC6P62333 389 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 GIT2Q14161 759 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 HERC4Q5GLZ8 1057 aaPredicted RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 CENPPQ6IPU0 288 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 FILIP1Q7Z7B0 1213 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 LRRC8AQ8IWT6 810 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 ANKRD35Q8N283 1001 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 RDM1Q8NG50 284 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 IL31RAQ8NI17 732 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 GTF3C2Q8WUA4 911 aaPredicted RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 SRRTQ9BXP5 876 aaKnown RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 SPATC1LQ9H0A9 340 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 ASCC2Q9H1I8 757 aaPredicted RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 ZSWIM4Q9H7M6 989 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 A1CFQ9NQ94 594 aaKnown RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 KCND2Q9NZV8 630 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 MAGEC2Q9UBF1 373 aaPredicted RBP10.78□□□□□ -0.68
SPARC-205ENST00000522348 PFASO15067 1338 aa10.78□□□□□ -0.68
SPARC-205ENST00000522348 FRMD3A2A2Y4 597 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 KCNJ18B7U540 433 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CHMP2AO43633 222 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 EIF3JO75822 258 aaKnown RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 LYPLA2O95372 231 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 TPM2P07951 284 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 GAP43P17677 238 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 JAK3P52333 1124 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 HERVK_113P62684 666 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 KRT76Q01546 638 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CYP4A11Q02928 519 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 LRRC63Q05C16 580 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 FSTL1Q12841 308 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 COASYQ13057 564 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CTTNQ14247 550 aaKnown RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 KCNJ12Q14500 433 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 STXBP2Q15833 593 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CCDC144BQ3MJ40 725 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 GNPTABQ3T906 1256 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 TCP11X2Q5H9J9 407 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 FAM26FQ5R3K3 315 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 ANKRD40Q6AI12 368 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 TTI2Q6NXR4 508 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 MYOCDQ8IZQ8 938 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CSGALNACT2Q8N6G5 542 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 C2orf69Q8N8R5 385 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 CCDC150Q8NCX0 1101 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 TRIM47Q96LD4 638 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 INPP4AQ96PE3 977 aaPredicted RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 MPHOSPH6Q99547 160 aaKnown RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 TSG101Q99816 390 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 BHMT2Q9H2M3 363 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 RRAGDQ9NQL2 400 aaPredicted RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 BTBD7Q9P203 1132 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 ADD3Q9UEY8 706 aaKnown RBP10.77□□□□□ -0.69
SPARC-205ENST00000522348 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 WDR90Q96KV7 1748 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 SCN4AP35499 1836 aa10.77□□□□□ -0.69
SPARC-205ENST00000522348 POLR2AP24928 1970 aaKnown RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 TESPA1A2RU30 521 aaPredicted RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 SPATA31C2B4DYI2 1134 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 POTEB2H3BUK9 544 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 DKC1O60832 514 aaKnown RBP eCLIP10.76□□□□□ -0.69
SPARC-205ENST00000522348 CETPP11597 493 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 GTF2A2P52657 109 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 ITGB3BPQ13352 177 aaPredicted RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 MOGSQ13724 837 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 HSP90AA4PQ58FG1 418 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 MAP1SQ66K74 1059 aaPredicted RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 SPECC1LQ69YQ0 1117 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 ZNF746Q6NUN9 644 aaPredicted RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 RINT1Q6NUQ1 792 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
SPARC-205ENST00000522348 APTXQ7Z2E3 356 aaKnown RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 NCAPG2Q86XI2 1143 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 KIAA0895Q8NCT3 520 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 CACTINQ8WUQ7 758 aaKnown RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 RBPJLQ9UBG7 517 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 DBR1Q9UK59 544 aaKnown RBP10.76□□□□□ -0.69
SPARC-205ENST00000522348 PNMA3Q9UL41 463 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 SLC45A1Q9Y2W3 748 aa10.76□□□□□ -0.69
SPARC-205ENST00000522348 SAMM50Q9Y512 469 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms