RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.51■□□□□ 0.874e-7■■■□□ 18.4
TRAPPC9-210ENST00000521667 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 DYDC2Q96IM9 177 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 BHMT2Q9H2M3 363 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 ADARB2Q9NS39 739 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 TBC1D7Q9P0N9 293 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 KIF20AO95235 890 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 MUTP22033 750 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 B3GNT9Q6UX72 402 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 WNK4Q96J92 1243 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 FGFBP2Q9BYJ0 223 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 UNC45AQ9H3U1 944 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 PAXBP1Q9Y5B6 917 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 ZSCAN12O43309 604 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 DSG3P32926 999 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 ZCWPW2Q504Y3 356 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 RNF207Q6ZRF8 634 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 TPH2Q8IWU9 490 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 REPS2Q8NFH8 660 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 TAAR1Q96RJ0 339 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 REEP2Q9BRK0 252 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 NOC4LQ9BVI4 516 aaKnown RBP20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 ZHX3Q9H4I2 956 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 TMOD4Q9NZQ9 345 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 UBIAD1Q9Y5Z9 338 aa20.5■□□□□ 0.87
TRAPPC9-210ENST00000521667 USP2O75604 605 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 OAZ1P54368 228 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 PRKG1Q13976 671 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 EPHA7Q15375 998 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 LRRC55Q6ZSA7 311 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 KCNH7Q9NS40 1196 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 ADAMTS5Q9UNA0 930 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 AFG3L2Q9Y4W6 797 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 FECHP22830 423 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 COG2Q14746 738 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 MIIPQ5JXC2 388 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 ZNF592Q92610 1267 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 RNF146Q9NTX7 359 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 PPP2R2CQ9Y2T4 447 aa20.49■□□□□ 0.87
TRAPPC9-210ENST00000521667 EIF2AK2P19525 551 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 MRPS9P82933 396 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 TBC1D8BQ0IIM8 1120 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 TKFCQ3LXA3 575 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 NSMFQ6X4W1 530 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 CATSPERGQ6ZRH7 1159 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 PIGOQ8TEQ8 1089 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 SCFD1Q8WVM8 642 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 RUSC1Q9BVN2 902 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 JADE2Q9NQC1 790 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 ABHD10Q9NUJ1 306 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 RIPK3Q9Y572 518 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 TUBB4AP04350 444 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 FKBP3Q00688 224 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 PGM5Q15124 567 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 DPY19L2Q6NUT2 758 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 TOGARAM2Q6ZUX3 1019 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 REXO1L1PQ8IX06 675 aa20.48■□□□□ 0.87
TRAPPC9-210ENST00000521667 RNF225M0QZC1 329 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 RIOK3O14730 519 aaKnown RBP20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 SNRNP48Q6IEG0 339 aaKnown RBP20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 RINT1Q6NUQ1 792 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 SFR1Q86XK3 245 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 NELFCDQ8IXH7 590 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 NEK9Q8TD19 979 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 DCPSQ96C86 337 aaKnown RBP20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 NACC1Q96RE7 527 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 RMDN3Q96TC7 470 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 AGO4Q9HCK5 861 aaKnown RBP20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 PARP14Q460N5 1801 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 PHIPQ8WWQ0 1821 aa20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 RBBP6Q7Z6E9 1792 aaKnown RBP20.47■□□□□ 0.87
TRAPPC9-210ENST00000521667 SOWAHDA6NJG2 315 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 ADM5C9JUS6 153 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 TBCAO75347 108 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 KRT9P35527 623 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 MTMR1Q13613 665 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 VWA3BQ502W6 1294 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 FKBP15Q5T1M5 1219 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 PDCD2LQ9BRP1 358 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 KCTD10Q9H3F6 313 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 PXMP2Q9NR77 195 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 ZNF214Q9UL59 606 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 SNCAIPQ9Y6H5 919 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 DDX39AO00148 427 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 TRAF5O00463 557 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 NKRFO15226 690 aaKnown RBP eCLIP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 DHX15O43143 795 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 GTF2F1P35269 517 aaKnown RBP eCLIP20.46■□□□□ 0.872e-7■■■■■ 33.7
TRAPPC9-210ENST00000521667 MAP3K9P80192 1104 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 VGLL4Q14135 290 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 MAN2A1Q16706 1144 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 SH3D19Q5HYK7 790 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 SULF1Q8IWU6 871 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 KIF18AQ8NI77 898 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 RBM46Q8TBY0 533 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 CEP63Q96MT8 703 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 ERGIC2Q96RQ1 377 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 NUP58Q9BVL2 599 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 PKD2L1Q9P0L9 805 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms