RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 NOP56O00567 594 aaKnown RBP10.74□□□□□ -0.69
CLK4-209ENST00000521621 ZNF76P36508 570 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
CLK4-209ENST00000521621 JAK3P52333 1124 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 BFSP2Q13515 415 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 TRIM71Q2Q1W2 868 aaKnown RBP10.74□□□□□ -0.69
CLK4-209ENST00000521621 NEK8Q86SG6 692 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 FBXO18Q8NFZ0 1043 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 ETNPPLQ8TBG4 499 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
CLK4-209ENST00000521621 ERAP1Q9NZ08 941 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
CLK4-209ENST00000521621 MBLAC1A4D2B0 266 aaPredicted RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 PSMD10O75832 226 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 TRIM29Q14134 588 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 KRT40Q6A162 431 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 SERINC5Q86VE9 423 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 TMEM199Q8N511 208 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 INTS4Q96HW7 963 aaKnown RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 TMX3Q96JJ7 454 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 AIFM3Q96NN9 605 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 MAFBQ9Y5Q3 323 aaPredicted RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 IGSF9BQ9UPX0 1349 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■□□□□ 8
CLK4-209ENST00000521621 TCF7P36402 384 aaPredicted RBP10.73□□□□□ -0.69
CLK4-209ENST00000521621 ACTR2P61160 394 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 PSMC6P62333 389 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 KIAA0753Q2KHM9 967 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 FAM160B1Q5W0V3 765 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 MIS18BP1Q6P0N0 1132 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 C7orf31Q8N865 590 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 PCYT2Q99447 389 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 ZNF577Q9BSK1 485 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 SQORQ9Y6N5 450 aa10.73□□□□□ -0.69
CLK4-209ENST00000521621 CCDC194A0A1B0GVG4 234 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 MSH4O15457 936 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 PQBP1O60828 265 aaKnown RBP10.72□□□□□ -0.69
CLK4-209ENST00000521621 PTGS1P23219 599 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 FPGSQ05932 587 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 PPP2R5CQ13362 524 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 CYP2W1Q8TAV3 490 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
CLK4-209ENST00000521621 C17orf102A2RUQ5 167 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 JAK2O60674 1132 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 CXCL10P02778 98 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 PSRC1Q6PGN9 363 aaPredicted RBP10.72□□□□□ -0.69
CLK4-209ENST00000521621 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 SLFN12Q8IYM2 578 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 VTI1AQ96AJ9 217 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 PGBD1Q96JS3 809 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 IL23AQ9NPF7 189 aa10.72□□□□□ -0.69
CLK4-209ENST00000521621 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
CLK4-209ENST00000521621 CCNE2O96020 404 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 SMIM10L2AP0DMW4 78 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 SMIM10L2BP0DMW5 78 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 RAG1P15918 1043 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 SAFBQ15424 915 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLK4-209ENST00000521621 PTGISQ16647 500 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 GDF6Q6KF10 455 aaPredicted RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 RPUSD2Q8IZ73 545 aaKnown RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 TDHQ8IZJ6 230 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 FAM167AQ96KS9 214 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 TEKT3Q9BXF9 490 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 HDAC6Q9UBN7 1215 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 KCNJ14Q9UNX9 436 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 WDR64B1ANS9 1081 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 PSAPP07602 524 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 ZNF484Q5JVG2 852 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 HABP4Q5JVS0 413 aaKnown RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 TAF2Q6P1X5 1199 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 DIS3L2Q8IYB7 885 aaKnown RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 RASGRP4Q8TDF6 673 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 C8orf76Q96K31 380 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 HIPK3Q9H422 1215 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 BCAS3Q9H6U6 928 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 DDX25Q9UHL0 483 aaKnown RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 TCEAL9Q9UHQ7 104 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 PCDHA10Q9Y5I2 948 aa10.71□□□□□ -0.69
CLK4-209ENST00000521621 MORC2Q9Y6X9 1032 aaPredicted RBP10.71□□□□□ -0.69
CLK4-209ENST00000521621 TMEM265A0A087WTH1 108 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.7
CLK4-209ENST00000521621 ZNF286BP0CG31 522 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 ITGB8P26012 769 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 PRR16Q569H4 304 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 FAM109BQ6ICB4 259 aaPredicted RBP10.71□□□□□ -0.7
CLK4-209ENST00000521621 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.7
CLK4-209ENST00000521621 HERVK_113Q902F9 699 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 BADQ92934 168 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 TRPV6Q9H1D0 765 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 AZI2Q9H6S1 392 aa10.71□□□□□ -0.7
CLK4-209ENST00000521621 ZMYND8Q9ULU4 1186 aaPredicted RBP10.71□□□□□ -0.7
CLK4-209ENST00000521621 HBP1O60381 514 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 DKC1O60832 514 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLK4-209ENST00000521621 BAIAP3O94812 1187 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms