RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 AFG1LQ8WV93 481 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 TNPO1Q92973 898 aaKnown RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 RNF26Q9BY78 433 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 DDX49Q9Y6V7 483 aaKnown RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 NOP56O00567 594 aaKnown RBP11.67□□□□□ -0.54
TRIM35-204ENST00000521283 GGPS1O95749 300 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 SCG2P13521 617 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 IFNAR1P17181 557 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 DNAJB2P25686 324 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 RFC2P35250 354 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 ADCY7P51828 1080 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 APOBRQ0VD83 1088 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 FUT2Q10981 343 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 BFSP2Q13515 415 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
TRIM35-204ENST00000521283 METTL7BQ6UX53 244 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 SH3RF1Q7Z6J0 888 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 CMTR1Q8N1G2 835 aaKnown RBP11.67□□□□□ -0.54
TRIM35-204ENST00000521283 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 CAGE1Q8TC20 777 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 SPATA33Q96N06 139 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 HIPK3Q9H422 1215 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 SH3GLB2Q9NR46 395 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 NOD1Q9Y239 953 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
TRIM35-204ENST00000521283 GRIN2DO15399 1336 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 SMCO2A6NFE2 343 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 B4GALT4O60513 344 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 CDKL5O76039 1030 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 F2P00734 622 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 GNAT1P11488 350 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
TRIM35-204ENST00000521283 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
TRIM35-204ENST00000521283 MRPS9P82933 396 aaKnown RBP11.66□□□□□ -0.54
TRIM35-204ENST00000521283 TMEM63BQ5T3F8 832 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 WWC2Q6AWC2 1192 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 COPS5Q92905 334 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 C22orf23Q9BZE7 217 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
TRIM35-204ENST00000521283 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
TRIM35-204ENST00000521283 ZNF215Q9UL58 517 aaPredicted RBP11.66□□□□□ -0.54
TRIM35-204ENST00000521283 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 TMEM265A0A087WTH1 108 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 RCCD1A6NED2 376 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 CPLX1O14810 134 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 RPLP2P05387 115 aaKnown RBP11.65□□□□□ -0.54
TRIM35-204ENST00000521283 UBA1P22314 1058 aaKnown RBP11.65□□□□□ -0.54
TRIM35-204ENST00000521283 CDC27P30260 824 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 PSMC6P62333 389 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.54
TRIM35-204ENST00000521283 MTMR1Q13613 665 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
TRIM35-204ENST00000521283 FAM47CQ5HY64 1035 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 GALNT17Q6IS24 598 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
TRIM35-204ENST00000521283 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 IL23AQ9NPF7 189 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 PDRG1Q9NUG6 133 aa11.65□□□□□ -0.54
TRIM35-204ENST00000521283 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-204ENST00000521283 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-204ENST00000521283 STXBP3O00186 592 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 HAS3O00219 553 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 ACTN1P12814 892 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 XBP1P17861 261 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 ITGB8P26012 769 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 SHHQ15465 462 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 PTGISQ16647 500 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 IL31RAQ8NI17 732 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 AFAP1L1Q8TED9 768 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 GPKOWQ92917 476 aaPredicted RBP eCLIP11.64□□□□□ -0.55
TRIM35-204ENST00000521283 RNPC3Q96LT9 517 aaKnown RBP11.64□□□□□ -0.55
TRIM35-204ENST00000521283 IRX2Q9BZI1 471 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-204ENST00000521283 TRPV6Q9H1D0 765 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 JADE2Q9NQC1 790 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 RTEL1Q9NZ71 1219 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 GTF2IRD1Q9UHL9 959 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 UBIAD1Q9Y5Z9 338 aa11.64□□□□□ -0.55
TRIM35-204ENST00000521283 LAMA3Q16787 3333 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 H3BRB1 525 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 CAND2O75155 1236 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 DEXIO95424 95 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 FGBP02675 491 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 CPA1P15085 419 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 SREBF1P36956 1147 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms