RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 KIF4BQ2VIQ3 1234 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 USH1GQ495M9 461 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 VWA3BQ502W6 1294 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 TOGARAM2Q6ZUX3 1019 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 DYMQ7RTS9 669 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 GPBP1Q86WP2 473 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 CREBRFQ8IUR6 639 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 TXLNBQ8N3L3 684 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 ACER1Q8TDN7 264 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 KIAA1683Q9H0B3 1180 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 KCND2Q9NZV8 630 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 WNT10BO00744 389 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 OPLAHO14841 1288 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 MSH4O15457 936 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 IPO7O95373 1038 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 EYA4O95677 639 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 ICAM1P05362 532 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 KRT18P05783 430 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 BCRP11274 1271 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 CYP11B2P19099 503 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 CYLC1P35663 651 aaPredicted RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 USP14P54578 494 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 GOLGA8FQ08AF8 430 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 GOLGA8DPQ0D2H9 430 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 KCNK18Q7Z418 384 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 ZC3H3Q8IXZ2 948 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 EHBP1Q8NDI1 1231 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 SLC5A5Q92911 643 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 RIT2Q99578 217 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 EPN1Q9Y6I3 576 aaPredicted RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 IGLV3-22A0A075B6J6 115 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 TTC26A0AVF1 554 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 SOWAHDA6NJG2 315 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 B4DLN1 442 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 PES1O00541 588 aaKnown RBP11.02□□□□□ -0.65
SPARC-202ENST00000520687 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 TRIM21P19474 475 aaKnown RBP11.02□□□□□ -0.65
SPARC-202ENST00000520687 HUNKP57058 714 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 MAP3K9P80192 1104 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 NCBP1Q09161 790 aaKnown RBP11.02□□□□□ -0.65
SPARC-202ENST00000520687 ZCWPW2Q504Y3 356 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 ARHGAP29Q52LW3 1261 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 CEP55Q53EZ4 464 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 HERC4Q5GLZ8 1057 aaPredicted RBP11.02□□□□□ -0.65
SPARC-202ENST00000520687 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 CATSPER3Q86XQ3 398 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
SPARC-202ENST00000520687 SPICE1Q8N0Z3 855 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 MNS1Q8NEH6 495 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 TTYH3Q9C0H2 523 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 TMEM39BQ9GZU3 492 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 HAUS4Q9H6D7 363 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 SEL1LQ9UBV2 794 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 VAV3Q9UKW4 847 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
SPARC-202ENST00000520687 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 COL4A3BPQ9Y5P4 624 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
SPARC-202ENST00000520687 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 PHF20L1A8MW92 1017 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 EFCAB8A8MWE9 144 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 MEIS1O00470 390 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 MED24O75448 989 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPARC-202ENST00000520687 SPATA31C1P0DKV0 1188 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 RPL13P26373 211 aaKnown RBP11.01□□□□□ -0.65
SPARC-202ENST00000520687 HSD17B4P51659 736 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 RASA3Q14644 834 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 ECM1Q16610 540 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 BMT2Q1RMZ1 405 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 XRRA1Q6P2D8 792 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 LRRC55Q6ZSA7 311 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 STXBP4Q6ZWJ1 553 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 SYN2Q92777 582 aaPredicted RBP11.01□□□□□ -0.65
SPARC-202ENST00000520687 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 FEZ1Q99689 392 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 EMILIN3Q9NT22 766 aa11.01□□□□□ -0.65
SPARC-202ENST00000520687 EIF3CLB5ME19 914 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms