RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 AMHP03971 560 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 KCNA2P16389 499 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 CDC27P30260 824 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 PPFIA1Q13136 1202 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 TCTN1Q2MV58 587 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 ZNF713Q8N859 430 aaPredicted RBP18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 DBF4BQ8NFT6 615 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 LMBR1Q8WVP7 490 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 SEPT1Q8WYJ6 367 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 SEPT8Q92599 483 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 RIC8AQ9NPQ8 531 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 JADE2Q9NQC1 790 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 TMEM260Q9NX78 707 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 UBIAD1Q9Y5Z9 338 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 DDX39AO00148 427 aaKnown RBP18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 STXBP3O00186 592 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 TAP1Q03518 808 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 GPNMBQ14956 572 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 TSGA10IPQ3SY00 556 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 JAKMIP3Q5VZ66 844 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 SYMPKQ92797 1274 aaKnown RBP18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 JPH1Q9HDC5 661 aaPredicted RBP18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 ERAP1Q9NZ08 941 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 TRPC6Q9Y210 931 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 SNX14Q9Y5W7 946 aa18.44■□□□□ 0.54
IGHV3-42-201ENST00000520410 LCHNA4D1U4 455 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 PPFIA3O75145 1194 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 UPP2O95045 317 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 FOSP01100 380 aaPredicted RBP18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 PSMA5P28066 241 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 ADD1P35611 737 aaKnown RBP18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 MBTPS1Q14703 1052 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 TJAP1Q5JTD0 557 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 TYW1BQ6NUM6 668 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 RSPH3Q86UC2 560 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 MXRA8Q9BRK3 442 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 SMARCAD1Q9H4L7 1026 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 SLC9A2Q9UBY0 812 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 TCEAL9Q9UHQ7 104 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 NRCAMQ92823 1304 aa18.43■□□□□ 0.54
IGHV3-42-201ENST00000520410 LAMA2P24043 3122 aaKnown RBP18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 ARHGEF15O94989 841 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 HSPA4P34932 840 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 AP3B2Q13367 1082 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 GRIK4Q16099 956 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 CCDC12Q8WUD4 166 aaPredicted RBP18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 UIMC1Q96RL1 719 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 GLT8D2Q9H1C3 349 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 KCNH7Q9NS40 1196 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 TUBE1Q9UJT0 475 aa18.42■□□□□ 0.54
IGHV3-42-201ENST00000520410 GSTTP1A0A1W2PQM5 241 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 EPOPA6NHQ4 379 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 MAFGO15525 162 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 CAND2O75155 1236 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 GJB5O95377 273 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 SCG2P13521 617 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 RPS6KB1P23443 525 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 SPRED2Q7Z698 418 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 GDPD5Q8WTR4 605 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 PHKBQ93100 1093 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 RAD9AQ99638 391 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 FAM49AQ9H0Q0 323 aaPredicted RBP18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 C6orf50Q9HD87 102 aa18.41■□□□□ 0.54
IGHV3-42-201ENST00000520410 BACH1O14867 736 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 ARP10275 920 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 GHRP10912 638 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 RCAN1P53805 252 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 CCT2P78371 535 aaKnown RBP18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 FUT2Q10981 343 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 PFKFB3Q16875 520 aaPredicted RBP18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 CEP55Q53EZ4 464 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 KRT40Q6A162 431 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 RUFY4Q6ZNE9 571 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 CYP2W1Q8TAV3 490 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 YME1L1Q96TA2 773 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 SLC26A6Q9BXS9 759 aa18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
IGHV3-42-201ENST00000520410 M0QZ92 97 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 IBSPP21815 317 aaPredicted RBP18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 HOXC8P31273 242 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 ACTR2P61160 394 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 GRB10Q13322 594 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 PLEKHG4Q58EX7 1191 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 TET1Q8NFU7 2136 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 DNAJB3Q8WWF6 145 aa18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 TNPO1Q92973 898 aaKnown RBP18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
IGHV3-42-201ENST00000520410 SREBF1P36956 1147 aa18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 MRPS5P82675 430 aaKnown RBP18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 REXO1Q8N1G1 1221 aaKnown RBP18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 ATXN2LQ8WWM7 1075 aaKnown RBP18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 ZBTB10Q96DT7 871 aa18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 AGO4Q9HCK5 861 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms