RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 COPS5Q92905 334 aa6.68□□□□□ -1.34
UBLCP1-202ENST00000519276 NEIL1Q96FI4 390 aaPredicted RBP6.68□□□□□ -1.34
UBLCP1-202ENST00000519276 LRG1P02750 347 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 ACRV1P26436 265 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 CSF2RBP32927 897 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 KRTAP10-9P60411 292 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 RAB33AQ14088 237 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 NCAPHQ15003 741 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 GNPTABQ3T906 1256 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 MAMDC4Q6UXC1 1216 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 HNRNPLLQ8WVV9 542 aaKnown RBP6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 KLHL6Q8WZ60 621 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 HSPBP1Q9NZL4 362 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 WASF3Q9UPY6 502 aa6.67□□□□□ -1.34
UBLCP1-202ENST00000519276 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
UBLCP1-202ENST00000519276 VHLLQ6RSH7 139 aa6.66□□□□□ -1.34
UBLCP1-202ENST00000519276 ARRDC4Q8NCT1 418 aa6.66□□□□□ -1.34
UBLCP1-202ENST00000519276 UBXN4Q92575 508 aa6.66□□□□□ -1.34
UBLCP1-202ENST00000519276 PPP1R1BQ9UD71 204 aaPredicted RBP6.66□□□□□ -1.34
UBLCP1-202ENST00000519276 SLC30A1Q9Y6M5 507 aa6.66□□□□□ -1.34
UBLCP1-202ENST00000519276 HGSO14964 777 aaPredicted RBP6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 FPR2P25090 351 aa6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 KRTAP10-11P60412 298 aa6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 ZNF627Q7L945 461 aa6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 FAM178BQ8IXR5 827 aa6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 PCDHB10Q9UN67 800 aa6.65□□□□□ -1.34
UBLCP1-202ENST00000519276 TCRBV5S2A0A599 114 aa6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 ZNF143P52747 638 aaPredicted RBP6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 INF2Q27J81 1249 aa6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 LARP1BQ659C4 914 aaKnown RBP6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 KIAA1211LQ6NV74 962 aa6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 TMC5Q6UXY8 1006 aa6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 REXO1L1PQ8IX06 675 aa6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 TIMM13Q9Y5L4 95 aaPredicted RBP6.65□□□□□ -1.35
UBLCP1-202ENST00000519276 SMAD2Q15796 467 aaKnown RBP6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 CEP68Q76N32 757 aa6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 ULK2Q8IYT8 1036 aa6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 TRMT2BQ96GJ1 504 aaKnown RBP6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 ZNF703Q9H7S9 590 aaPredicted RBP6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 SIRPGQ9P1W8 387 aa6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 PCDHB4Q9Y5E5 795 aa6.64□□□□□ -1.35
UBLCP1-202ENST00000519276 GTF2A2P52657 109 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 RAC3P60763 192 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 DDR2Q16832 855 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 ZNF568Q3ZCX4 644 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 IQCEQ6IPM2 695 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 C6orf15Q6UXA7 325 aaPredicted RBP6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 CELF2-AS1Q8N7Q2 184 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 MICAL1Q8TDZ2 1067 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 FGD4Q96M96 766 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 GPRC5CQ9NQ84 441 aa6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 COA3Q9Y2R0 106 aaPredicted RBP6.63□□□□□ -1.35
UBLCP1-202ENST00000519276 ANKRD34BA5PLL1 514 aa6.62□□□□□ -1.35
UBLCP1-202ENST00000519276 TADA3O75528 432 aa6.62□□□□□ -1.35
UBLCP1-202ENST00000519276 DDAH1O94760 285 aa6.62□□□□□ -1.35
UBLCP1-202ENST00000519276 EPHX1P07099 455 aa6.62□□□□□ -1.35
UBLCP1-202ENST00000519276 SERINC3Q13530 473 aa6.62□□□□□ -1.35
UBLCP1-202ENST00000519276 MKL1Q969V6 931 aa6.62□□□□□ -1.35
UBLCP1-202ENST00000519276 GJB6O95452 261 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 KNG1P01042 644 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 NAT2P11245 290 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 BMP5P22003 454 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 COL10A1Q03692 680 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 SCRN1Q12765 414 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 GPR155Q7Z3F1 870 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 APBA2Q99767 749 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 KATNBL1Q9H079 304 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 CCDC113Q9H0I3 377 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 ST7Q9NRC1 585 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 MSRB2Q9Y3D2 182 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 LRP10Q7Z4F1 713 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 EPN3Q9H201 632 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 SUGT1Q9Y2Z0 365 aa6.61□□□□□ -1.35
UBLCP1-202ENST00000519276 CR2P20023 1033 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 MRPS21P82921 87 aaKnown RBP6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 USP10Q14694 798 aaKnown RBP6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 STEAP3Q658P3 488 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 ZNF513Q8N8E2 541 aaPredicted RBP6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 DTX3Q8N9I9 347 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 CLIP3Q96DZ5 547 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 TMEM169Q96HH4 297 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 DNAJC2Q99543 621 aaKnown RBP6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 OAZ3Q9UMX2 235 aa6.6□□□□□ -1.35
UBLCP1-202ENST00000519276 FOXN1O15353 648 aa6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 KRT4P19013 534 aa6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 MRM1Q6IN84 353 aaKnown RBP6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 EEPD1Q7L9B9 569 aa6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 GLCCI1Q86VQ1 547 aa6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 TTPALQ9BTX7 342 aa6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 AKT3Q9Y243 479 aa6.59□□□□□ -1.35
UBLCP1-202ENST00000519276 B2RBV5 119 aa6.58□□□□□ -1.36
UBLCP1-202ENST00000519276 SUSD5O60279 629 aa6.58□□□□□ -1.36
UBLCP1-202ENST00000519276 ADRA1BP35368 520 aa6.58□□□□□ -1.36
UBLCP1-202ENST00000519276 VASNQ6EMK4 673 aa6.58□□□□□ -1.36
UBLCP1-202ENST00000519276 Q6ZPA2 131 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms