RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 JADE2Q9NQC1 790 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 STK17AQ9UEE5 414 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 DNAJC25-GNG10A0A024R161 153 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 ECM1Q16610 540 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 KLHL10Q6JEL2 608 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 XRRA1Q6P2D8 792 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 FAM20AQ96MK3 541 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 TRIM9Q9C026 710 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 KCNH7Q9NS40 1196 aa16.19■□□□□ 0.18
CLN8-204ENST00000519254 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
CLN8-204ENST00000519254 STRNO43815 780 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 ZNF500O60304 480 aaPredicted RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 SEMA3FQ13275 785 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 STXBP2Q15833 593 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 HYIQ5T013 277 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 LRCH2Q5VUJ6 765 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 NCAPH2Q6IBW4 605 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 KCNK18Q7Z418 384 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 DPP9Q86TI2 863 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 NLRX1Q86UT6 975 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 FGD4Q96M96 766 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 IPO5O00410 1097 aaKnown RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 CHMP2AO43633 222 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 GAS7O60861 476 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 COBLO75128 1261 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 STX17P56962 302 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 GRB14Q14449 540 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 MCM6Q14566 821 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 EEPD1Q7L9B9 569 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 NIPA1Q7RTP0 329 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 ABRAQ8N0Z2 381 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 RAD54LQ92698 747 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 SLC5A5Q92911 643 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 CDK5RAP3Q96JB5 506 aa16.18■□□□□ 0.18
CLN8-204ENST00000519254 MPHOSPH6Q99547 160 aaKnown RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 AGO4Q9HCK5 861 aaKnown RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 SAMSN1Q9NSI8 373 aaKnown RBP16.18■□□□□ 0.18
CLN8-204ENST00000519254 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 B4DLN1 442 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 RGS20O76081 388 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 PRCPP42785 496 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 UBASH3AP57075 661 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 AMPD3Q01432 767 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 HSP90AA4PQ58FG1 418 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 SEPT14Q6ZU15 432 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 SV2BQ7L1I2 683 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 LARP4BQ92615 738 aaKnown RBP16.17■□□□□ 0.18
CLN8-204ENST00000519254 NAP1L5Q96NT1 182 aaPredicted RBP16.17■□□□□ 0.18
CLN8-204ENST00000519254 INPP4AQ96PE3 977 aaPredicted RBP16.17■□□□□ 0.18
CLN8-204ENST00000519254 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
CLN8-204ENST00000519254 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 MYMKA6NI61 221 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 TRPA1O75762 1119 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
CLN8-204ENST00000519254 SERPINC1P01008 464 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 DHX8Q14562 1220 aaKnown RBP16.16■□□□□ 0.18
CLN8-204ENST00000519254 GNPTABQ3T906 1256 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 GIMAP8Q8ND71 665 aaPredicted RBP16.16■□□□□ 0.18
CLN8-204ENST00000519254 GPRASP2Q96D09 838 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 TEKT3Q9BXF9 490 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 VAV3Q9UKW4 847 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
CLN8-204ENST00000519254 SLC15A5A6NIM6 579 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 TNPO2O14787 897 aaKnown RBP16.15■□□□□ 0.18
CLN8-204ENST00000519254 SLC26A4O43511 780 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 PSMD10O75832 226 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 STAM2O75886 525 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 EDNRBP24530 442 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 MAP2K2P36507 400 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 CCT6AP40227 531 aaKnown RBP16.15■□□□□ 0.18
CLN8-204ENST00000519254 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
CLN8-204ENST00000519254 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 ADSSL1Q8N142 457 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 CACTINQ8WUQ7 758 aaKnown RBP16.15■□□□□ 0.18
CLN8-204ENST00000519254 INTS13Q9NVM9 706 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 RWDD2AQ9UIY3 292 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 CBFA2T2O43439 604 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 SORBS3O60504 671 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 ATP9AO75110 1047 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 ASIC1P78348 528 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 LRMPQ12912 555 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 ARID5BQ14865 1188 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 CDKAL1Q5VV42 579 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 CNNM4Q6P4Q7 775 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 FBXO16Q8IX29 292 aaPredicted RBP16.15■□□□□ 0.18
CLN8-204ENST00000519254 NELFBQ8WX92 580 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 IMPACTQ9P2X3 320 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 PYCARDQ9ULZ3 195 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 KDM3AQ9Y4C1 1321 aa16.15■□□□□ 0.18
CLN8-204ENST00000519254 KIAA1217Q5T5P2 1943 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms