RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CLUHP3Q96NS8 147 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 TRIM39Q9HCM9 518 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 TMEM260Q9NX78 707 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 SRPK3Q9UPE1 567 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 TCRBV16S1A1N1A0A5B0 115 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 MAN2B1O00754 1011 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 KCNQ2O43526 872 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 SASH1O94885 1247 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 ASMTLO95671 621 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 CKMP06732 381 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 KCNC1P48547 511 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 SARSP49591 514 aaKnown RBP5.55□□□□□ -1.52
SKP1-205ENST00000519054 PHF19Q5T6S3 580 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 BTBD8Q5XKL5 378 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 PROSER1Q86XN7 944 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 TMEM209Q96SK2 561 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 SMURF1Q9HCE7 757 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 LUC7LQ9NQ29 371 aaKnown RBP5.55□□□□□ -1.52
SKP1-205ENST00000519054 RIC8BQ9NVN3 520 aa5.55□□□□□ -1.52
SKP1-205ENST00000519054 OTOL1A6NHN0 477 aaPredicted RBP5.54□□□□□ -1.52
SKP1-205ENST00000519054 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 ACOT7O00154 380 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
SKP1-205ENST00000519054 RPL13P26373 211 aaKnown RBP5.54□□□□□ -1.52
SKP1-205ENST00000519054 RTP5Q14D33 572 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 FNDC3BQ53EP0 1204 aaKnown RBP5.54□□□□□ -1.52
SKP1-205ENST00000519054 CD276Q5ZPR3 534 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 VASNQ6EMK4 673 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 ABHD17CQ6PCB6 329 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 TTLL10Q6ZVT0 673 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 NLGN4XQ8N0W4 816 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 CLIC6Q96NY7 704 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 CELF4Q9BZC1 486 aaKnown RBP5.54□□□□□ -1.52
SKP1-205ENST00000519054 HSPBP1Q9NZL4 362 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 CROTQ9UKG9 612 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 MRPL42Q9Y6G3 142 aaKnown RBP5.54□□□□□ -1.52
SKP1-205ENST00000519054 ATP23Q9Y6H3 246 aa5.54□□□□□ -1.52
SKP1-205ENST00000519054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.53□□□□□ -1.52
SKP1-205ENST00000519054 FAM90A27PA6NNH2 459 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 DDX3XO00571 662 aaKnown RBP eCLIP5.53□□□□□ -1.52
SKP1-205ENST00000519054 KCNA6P17658 529 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 HOXA5P20719 270 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 LACTBP83111 547 aaPredicted RBP5.53□□□□□ -1.52
SKP1-205ENST00000519054 FIGNQ5HY92 759 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 PRR31Q5SQ13 230 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 NT5DC1Q5TFE4 455 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 PRAMEF18Q5VWM3 479 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 JAZF1Q86VZ6 243 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 IGSF22Q8N9C0 903 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 ADAMTS17Q8TE56 1095 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 PDGFDQ9GZP0 370 aaPredicted RBP5.53□□□□□ -1.52
SKP1-205ENST00000519054 XYLT2Q9H1B5 865 aa5.53□□□□□ -1.52
SKP1-205ENST00000519054 DNAJC8O75937 253 aaPredicted RBP5.52□□□□□ -1.53
SKP1-205ENST00000519054 ENO2P09104 434 aaPredicted RBP5.52□□□□□ -1.53
SKP1-205ENST00000519054 GLRBP48167 497 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 ZNF460Q14592 562 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 C21orf62-AS1Q17RA5 79 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 CPZQ66K79 652 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 MCTP2Q6DN12 878 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 OVCH1Q7RTY7 1134 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 ZNF761Q86XN6 746 aaPredicted RBP5.52□□□□□ -1.53
SKP1-205ENST00000519054 HOMER1Q86YM7 354 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 DTX3Q8N9I9 347 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 ADAM7Q9H2U9 754 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 DLL4Q9NR61 685 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 FANCLQ9NW38 375 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
SKP1-205ENST00000519054 TNPO3Q9Y5L0 923 aaKnown RBP5.52□□□□□ -1.53
SKP1-205ENST00000519054 A0A0G2JLL6 359 aaPredicted RBP5.51□□□□□ -1.53
SKP1-205ENST00000519054 PRAMEF25A6NGN4 478 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 SCDO00767 359 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 OPA1O60313 960 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 SDSP20132 328 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 IGFALSP35858 605 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 MLLT6P55198 1093 aaPredicted RBP5.51□□□□□ -1.53
SKP1-205ENST00000519054 GJA9P57773 515 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 PFKPQ01813 784 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 PABPC4Q13310 644 aaKnown RBP eCLIP5.51□□□□□ -1.53
SKP1-205ENST00000519054 SKIDA1Q1XH10 827 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 TKFCQ3LXA3 575 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 TMEM177Q53S58 311 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 FSTL4Q6MZW2 842 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 HHIPL2Q6UWX4 724 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 APPBP2Q92624 585 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 WRNIP1Q96S55 665 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 SLC39A2Q9NP94 309 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 USP40Q9NVE5 1235 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 SAMD15Q9P1V8 674 aa5.51□□□□□ -1.53
SKP1-205ENST00000519054 ZNF839A8K0R7 811 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 CLASP2O75122 1294 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 CDC45O75419 566 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 CYP7B1O75881 506 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 GLRX3O76003 335 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 C4BPAP04003 597 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 ASLP04424 464 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 ZNF28P17035 718 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 GJA4P35212 333 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 IL13P35225 146 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 DBPQ10586 325 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms