RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	VPS54	Q9P1Q0	977 aa		27.53	■■■□□ 2
CNOT7-204	ENST00000518885	MSRA	Q9UJ68	235 aa		27.53	■■■□□ 2
CNOT7-204	ENST00000518885	EMSY	Q7Z589	1322 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	NRCAM	Q92823	1304 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	CAND2	O75155	1236 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	CKB	P12277	381 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	GALNT17	Q6IS24	598 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	SERINC5	Q86VE9	423 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	CTAGE1	Q96RT6	745 aa		27.52	■■■□□ 2
CNOT7-204	ENST00000518885	AGO4	Q9HCK5	861 aa	Known RBP	27.52	■■■□□ 2
CNOT7-204	ENST00000518885	TANC1	Q9C0D5	1861 aa		27.51	■■□□□ 1.99
CNOT7-204	ENST00000518885	BAIAP3	O94812	1187 aa		27.51	■■□□□ 1.99
CNOT7-204	ENST00000518885	DNAJB2	P25686	324 aa		27.51	■■□□□ 1.99
CNOT7-204	ENST00000518885	PLA2G4D	Q86XP0	818 aa		27.51	■■□□□ 1.99
CNOT7-204	ENST00000518885	IL17RA	Q96F46	866 aa		27.51	■■□□□ 1.99
CNOT7-204	ENST00000518885	HOXC8	P31273	242 aa		27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	TRIM50	Q86XT4	487 aa		27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	CYP2W1	Q8TAV3	490 aa		27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	DHX38	Q92620	1227 aa	Known RBP	27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	TIFA	Q96CG3	184 aa		27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	LARP6	Q9BRS8	491 aa	Known RBP	27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	RNPEP	Q9H4A4	650 aa		27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	STXBP5L	Q9Y2K9	1186 aa		27.5	■■□□□ 1.99
CNOT7-204	ENST00000518885	GSTTP1	A0A1W2PQM5	241 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	PFKFB2	O60825	505 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	PPFIA3	O75145	1194 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	RPLP2	P05387	115 aa	Known RBP	27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	AR	P10275	920 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	WASF1	Q92558	559 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	TBC1D22B	Q9NU19	505 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	PCDHA4	Q9UN74	947 aa		27.49	■■□□□ 1.99
CNOT7-204	ENST00000518885	EFCAB14	O75071	495 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	THPO	P40225	353 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	SLC26A2	P50443	739 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	CRYGN	Q8WXF5	182 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	FAM161B	Q96MY7	647 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	SLC9A7	Q96T83	725 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	SEMA6B	Q9H3T3	888 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	SETD4	Q9NVD3	440 aa		27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	CXXC1	Q9P0U4	656 aa	Predicted RBP	27.48	■■□□□ 1.99
CNOT7-204	ENST00000518885	STK36	Q9NRP7	1315 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	IPO5	O00410	1097 aa	Known RBP	27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	ATP2A2	P16615	1042 aa	Known RBP	27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	KCNJ6	P48051	423 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	USP11	P51784	963 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	AK2	P54819	239 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	ACTR2	P61160	394 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	ZNF200	P98182	395 aa	Predicted RBP	27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	SCRN1	Q12765	414 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	PPFIA1	Q13136	1202 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	CNKSR3	Q6P9H4	555 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	PHOSPHO2	Q8TCD6	241 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	ZNF577	Q9BSK1	485 aa		27.47	■■□□□ 1.99
CNOT7-204	ENST00000518885	RSPH10B2	B2RC85	870 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	FAM86B1	E9PN63	330 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	TREH	O43280	583 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	LGR5	O75473	907 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	FAM86B2	P0C5J1	330 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	RSPH10B	P0C881	870 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	TRIM71	Q2Q1W2	868 aa	Known RBP	27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	ZNF618	Q5T7W0	954 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	FAM160B1	Q5W0V3	765 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	TAF2	Q6P1X5	1199 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	PLPPR4	Q7Z2D5	763 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	RSPH3	Q86UC2	560 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	LMBR1	Q8WVP7	490 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	PBX4	Q9BYU1	374 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	TPCN1	Q9ULQ1	816 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	DOCK5	Q9H7D0	1870 aa		27.46	■■□□□ 1.99
CNOT7-204	ENST00000518885	IGLV3-22	A0A075B6J6	115 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	RRN3P2	A6NIE6	340 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	CXCL10	P02778	98 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	CIITA	P33076	1130 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	NEK4	P51957	841 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	ITGB3BP	Q13352	177 aa	Predicted RBP	27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	BLID	Q8IZY5	108 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	DAGLB	Q8NCG7	672 aa		27.45	■■□□□ 1.98
CNOT7-204	ENST00000518885	MARK3	P27448	753 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	STAT5B	P51692	787 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	PRR16	Q569H4	304 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	MIS18BP1	Q6P0N0	1132 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	RASGRP4	Q8TDF6	673 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	TRPC6	Q9Y210	931 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	TELO2	Q9Y4R8	837 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	PCDHA11	Q9Y5I1	949 aa		27.44	■■□□□ 1.98
CNOT7-204	ENST00000518885	KIF28P	B7ZC32	967 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	BACH1	O14867	736 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	KRT76	Q01546	638 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	IKBKE	Q14164	716 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	HIC1	Q14526	733 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	GRIK4	Q16099	956 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	SMAP1	Q8IYB5	467 aa	Predicted RBP	27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	VWCE	Q96DN2	955 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	ZNF576	Q9H609	170 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	SLC28A3	Q9HAS3	691 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	TUBE1	Q9UJT0	475 aa		27.43	■■□□□ 1.98
CNOT7-204	ENST00000518885	ABHD14A-ACY1	A0A1B0GW23	586 aa		27.42	■■□□□ 1.98
CNOT7-204	ENST00000518885	GRXCR1	A8MXD5	290 aa		27.42	■■□□□ 1.98
CNOT7-204	ENST00000518885	ATG7	O95352	703 aa		27.42	■■□□□ 1.98
CNOT7-204	ENST00000518885	ZNF746	Q6NUN9	644 aa	Predicted RBP	27.42	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms