RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 DDX12PQ92771 950 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 DYDC2Q96IM9 177 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 PURBQ96QR8 312 aaKnown RBP16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 NACC1Q96RE7 527 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 TXNRD2Q9NNW7 524 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 MORF4L1Q9UBU8 362 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
TRAPPC9-205ENST00000518839 WDR81Q562E7 1941 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 MANSC4A6NHS7 340 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 WDR64B1ANS9 1081 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 PSMA7O14818 248 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 DKC1O60832 514 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 SLITRK3O94933 977 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 KRT18P05783 430 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 FCER1AP12319 257 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 EDNRBP24530 442 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 CDC25BP30305 580 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 ZNF75DP51815 510 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 SLC12A3P55017 1021 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 CYP4A11Q02928 519 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 PAK1Q13153 545 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 ITGB3BPQ13352 177 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 GPBP1Q86WP2 473 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 TPH2Q8IWU9 490 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 ADSSL1Q8N142 457 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 MRFAP1L1Q96HT8 127 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 SENP7Q9BQF6 1050 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
TRAPPC9-205ENST00000518839 GOLGA6L6A8MZA4 724 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 SPATA31C2B4DYI2 1134 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 DDX39AO00148 427 aaKnown RBP16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 CYP2C8P10632 490 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 IDEP14735 1019 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 CYP11B2P19099 503 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 CNTN2Q02246 1040 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 Q3C1V9 767 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 DYMQ7RTS9 669 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 RASAL3Q86YV0 1011 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 SMAP1Q8IYB5 467 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 DNAJC19Q96DA6 116 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 ZSWIM4Q9H7M6 989 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 RGL1Q9NZL6 768 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 PKD2L1Q9P0L9 805 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 CTNND2Q9UQB3 1225 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 GDAQ9Y2T3 454 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 PLXNA1Q9UIW2 1896 aa16.78■□□□□ 0.28
TRAPPC9-205ENST00000518839 DNAJC25-GNG10A0A024R161 153 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 BICDL2A1A5D9 508 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 SOWAHBA6NEL2 793 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 AP5Z1O43299 807 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 KIF20AO95235 890 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 LYPLA2O95372 231 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 TPM3P06753 285 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 PRCPP42785 496 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 ZNF157P51786 506 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 MKRN3Q13064 507 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 CTTNQ14247 550 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 RGMBQ6NW40 437 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 ABRAQ8N0Z2 381 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 NELFBQ8WX92 580 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 LXNQ9BS40 222 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 PANK4Q9NVE7 773 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 SAMM50Q9Y512 469 aa16.77■□□□□ 0.28
TRAPPC9-205ENST00000518839 PASKQ96RG2 1323 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 FRMD3A2A2Y4 597 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 STRNO43815 780 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 PEX10O60683 326 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 TGFB3P10600 412 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 KCNA2P16389 499 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 QARSP47897 775 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 INHBEP58166 350 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 SPAG1Q07617 926 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 EHHADHQ08426 723 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 WDR78Q5VTH9 848 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 FAM43AQ8N2R8 423 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 BHMT2Q9H2M3 363 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 DBR1Q9UK59 544 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-205ENST00000518839 ASB14A6NK59 587 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 ATP9AO75110 1047 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 RGS20O76081 388 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 ZNF18P17022 549 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 GAP43P17677 238 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 CCNE1P24864 410 aa16.75■□□□□ 0.27
TRAPPC9-205ENST00000518839 PSMC5P62195 406 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms