RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 PDGFDQ9GZP0 370 aaPredicted RBP7.3□□□□□ -1.24
FAM49B-204ENST00000517801 TYW1Q9NV66 732 aaKnown RBP7.3□□□□□ -1.24
FAM49B-204ENST00000517801 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
FAM49B-204ENST00000517801 SRPK3Q9UPE1 567 aa7.3□□□□□ -1.24
FAM49B-204ENST00000517801 APOBEC2Q9Y235 224 aaKnown RBP7.3□□□□□ -1.24
FAM49B-204ENST00000517801 ZNF891A8MT65 544 aaPredicted RBP7.29□□□□□ -1.24
FAM49B-204ENST00000517801 ALG1L2C9J202 215 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 CLASP2O75122 1294 aaKnown RBP7.29□□□□□ -1.24
FAM49B-204ENST00000517801 ASGR2P07307 311 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 FBLN1P23142 703 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 LSSP48449 732 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 EPHA5P54756 1037 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 TUSC3Q13454 348 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 SYDE1Q6ZW31 735 aaPredicted RBP7.29□□□□□ -1.24
FAM49B-204ENST00000517801 KCTD1Q719H9 257 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 PTRH1Q86Y79 214 aaKnown RBP7.29□□□□□ -1.24
FAM49B-204ENST00000517801 MIB1Q86YT6 1006 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 FAM126BQ8IXS8 530 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 ARRDC4Q8NCT1 418 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 SMC1BQ8NDV3 1235 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 MZB1Q8WU39 189 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 KCNN1Q92952 543 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 YIPF4Q9BSR8 244 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 SGPP1Q9BX95 441 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 CD244Q9BZW8 370 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 RNF38Q9H0F5 515 aa7.29□□□□□ -1.24
FAM49B-204ENST00000517801 IRS2Q9Y4H2 1338 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 MAN2B1O00754 1011 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 HIP1RO75146 1068 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 NCAM1P13591 858 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 GJA4P35212 333 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 IL2P60568 153 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 TARBP2Q15633 366 aaKnown RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 RNF219Q5W0B1 726 aaPredicted RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 OGFOD2Q6N063 350 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 ETV3LQ6ZN32 361 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 RBM12BQ8IXT5 1001 aaKnown RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 RPUSD2Q8IZ73 545 aaKnown RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 NXPE1Q8N323 547 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 PRPF38AQ8NAV1 312 aaKnown RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 FAM126AQ9BYI3 521 aaPredicted RBP7.28□□□□□ -1.24
FAM49B-204ENST00000517801 GCM1Q9NP62 436 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 PCDHA5Q9Y5H7 936 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 ATP23Q9Y6H3 246 aa7.28□□□□□ -1.24
FAM49B-204ENST00000517801 H7C1D1 291 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 N4BP3O15049 544 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 FKBP9O95302 570 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 LTFP02788 710 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 ATP2A2P16615 1042 aaKnown RBP7.27□□□□□ -1.25
FAM49B-204ENST00000517801 PFKLP17858 780 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 KPNA1P52294 538 aaPredicted RBP7.27□□□□□ -1.25
FAM49B-204ENST00000517801 EPHB3P54753 998 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 NCKAP1LP55160 1127 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 DLG4P78352 724 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 IRF9Q00978 393 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 SKOR2Q2VWA4 1001 aaPredicted RBP7.27□□□□□ -1.25
FAM49B-204ENST00000517801 FKBP9P1Q75LS8 142 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 NECAB2Q7Z6G3 386 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 C11orf74Q86VG3 221 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 NOSTRINQ8IVI9 506 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 TTLL11Q8NHH1 800 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 WDR66Q8TBY9 1149 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 CLEC4DQ8WXI8 215 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 CPA5Q8WXQ8 436 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 HOMER2Q9NSB8 354 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 TELO2Q9Y4R8 837 aa7.27□□□□□ -1.25
FAM49B-204ENST00000517801 ETV2O00321 342 aaPredicted RBP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 KCNK3O14649 394 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 GPR39O43194 453 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 TMEM253P0C7T8 217 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 ZBTB48P10074 688 aaPredicted RBP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 YBX3P16989 372 aaKnown RBP eCLIP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 GLDCP23378 1020 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 CDKN1CP49918 316 aaPredicted RBP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 STAT4Q14765 748 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 ZNF174Q15697 407 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 PASD1Q8IV76 773 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 EFHBQ8N7U6 833 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 DDX11Q96FC9 970 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 TOE1Q96GM8 510 aaKnown RBP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 SLC38A3Q99624 504 aa7.26□□□□□ -1.25
FAM49B-204ENST00000517801 THG1LQ9NWX6 298 aaKnown RBP7.26□□□□□ -1.25
FAM49B-204ENST00000517801 NEMP1O14524 444 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 BUB1BO60566 1050 aaPredicted RBP7.25□□□□□ -1.25
FAM49B-204ENST00000517801 ATF2P15336 505 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 ADCYAP1R1P41586 468 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 MC3RP41968 323 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 GRIN1Q05586 938 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
FAM49B-204ENST00000517801 CREB3L3Q68CJ9 461 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 ZC3H18Q86VM9 953 aaKnown RBP7.25□□□□□ -1.25
FAM49B-204ENST00000517801 IGDCC3Q8IVU1 814 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 POU5F2Q8N7G0 328 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 CHTF18Q8WVB6 975 aa7.25□□□□□ -1.25
FAM49B-204ENST00000517801 DLG3Q92796 817 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms