RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SAMD3Q8N6K7 520 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 APBB2Q92870 758 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 C11orf84Q9BUA3 381 aaPredicted RBP8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 DSCC1Q9BVC3 393 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 UPF3BQ9BZI7 483 aaKnown RBP8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CNNM2Q9H8M5 875 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ALG13Q9NP73 1137 aaKnown RBP8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MAP3K20Q9NYL2 800 aaKnown RBP8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ZNF215Q9UL58 517 aaPredicted RBP8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MYH6P13533 1939 aa8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PTPRZ1P23471 2315 aaPredicted RBP8.07□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CACNA1HO95180 2353 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PNMA6FA0A0J9YX94 578 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 C5orf67F2Z3F1 127 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 STXBP3O00186 592 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ENPP3O14638 875 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CYTH3O43739 400 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 TBX10O75333 385 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RB1P06400 928 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 IBSPP21815 317 aaPredicted RBP8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ICAM3P32942 547 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ADAM17P78536 824 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 BTG3Q14201 252 aaPredicted RBP8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 LPIN1Q14693 890 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 GRM4Q14833 912 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MFSD14AQ96MC6 490 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 INPP4AQ96PE3 977 aaPredicted RBP8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PHOX2BQ99453 314 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 LMAN2LQ9H0V9 348 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 IL25Q9H293 177 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RIOX1Q9H6W3 641 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CD207Q9UJ71 328 aa8.06□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ADGRA3Q8IWK6 1321 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 IFIT3O14879 490 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 FIBPO43427 364 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 DNAJB1P25685 340 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MARK3P27448 753 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 NDUFV1P49821 464 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 IGBP1P78318 339 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MGAT3Q09327 533 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PPFIA1Q13136 1202 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ADAM15Q13444 863 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SMAD4Q13485 552 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PAN2Q504Q3 1202 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 HERC4Q5GLZ8 1057 aaPredicted RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 USP17L6PQ6QN14 398 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CHD1LQ86WJ1 897 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SMARCC2Q8TAQ2 1214 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 DNAJB3Q8WWF6 145 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CLP1Q92989 425 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ZBTB10Q96DT7 871 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 POP1Q99575 1024 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 KCNH6Q9H252 994 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RWDD3Q9Y3V2 267 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CDY2AQ9Y6F7 541 aa8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MRPL42Q9Y6G3 142 aaKnown RBP8.05□□□□□ -1.12
SCARNA11.1-201ENST00000516918 NRCAMQ92823 1304 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 HIP1O00291 1037 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ATP9AO75110 1047 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PPFIA3O75145 1194 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 STAM2O75886 525 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 DGKIO75912 1065 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 MMP1P03956 469 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ITGB1P05556 798 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CD52P31358 61 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 TCF7P36402 384 aaPredicted RBP8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 GATMP50440 423 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 TRDNQ13061 729 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 TRAF1Q13077 416 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CAMK1Q14012 370 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 WTAPQ15007 396 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 GRIK4Q16099 956 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 FBXO47Q5MNV8 452 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 IER5LQ5T953 404 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 TAF2Q6P1X5 1199 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ADGRD2Q7Z7M1 963 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RBM23Q86U06 439 aaKnown RBP8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RSPH3Q86UC2 560 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 RTN4RL1Q86UN2 441 aaPredicted RBP8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 NLRX1Q86UT6 975 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SMC5Q8IY18 1101 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 KLHL23Q8NBE8 558 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PRSS33Q8NF86 280 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SPPL3Q8TCT6 385 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 LINC01599Q8WXQ3 324 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 EDAQ92838 391 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 GLG1Q92896 1179 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 CUL5Q93034 780 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 PBXIP1Q96AQ6 731 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 ZNF689Q96CS4 500 aaPredicted RBP8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 SENP7Q9BQF6 1050 aa8.04□□□□□ -1.12
SCARNA11.1-201ENST00000516918 FAM49AQ9H0Q0 323 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms