RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 CNGB1Q14028 1251 aaPredicted RBP1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 SKIDA1Q1XH10 827 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 INF2Q27J81 1249 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 ZNF326Q5BKZ1 582 aaKnown RBP1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 PHF19Q5T6S3 580 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 KIAA1211LQ6NV74 962 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 SYCE2Q6PIF2 218 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 MAMDC4Q6UXC1 1216 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 EP400NLQ6ZTU2 488 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 GSPT2Q8IYD1 628 aaKnown RBP1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 ZNF808Q8N4W9 903 aaPredicted RBP1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 STPG3Q8N7X2 389 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 CACTINQ8WUQ7 758 aaKnown RBP1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 CPLX3Q8WVH0 158 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 COPS5Q92905 334 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 NELFAQ9H3P2 528 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 TLR9Q9NR96 1032 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 ASH2LQ9UBL3 628 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 PCDHB10Q9UN67 800 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 PCDHA2Q9Y5H9 948 aa1.97□□□□□ -2.09
RNU6-1258P-201ENST00000516911 ESYT3A0FGR9 886 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 TADA3O75528 432 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 RPS6KA4O75676 772 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 CPP00450 1065 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 KNG1P01042 644 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 GCP02774 474 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ITGAVP06756 1048 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SNRPB2P08579 225 aaKnown RBP1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 POLD1P28340 1107 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 MSX2P35548 267 aaPredicted RBP1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 RGS19P49795 217 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 MEOX1P50221 254 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 COL9A2Q14055 689 aaPredicted RBP1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 GRM7Q14831 915 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 WDR72Q3MJ13 1102 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 LRCH2Q5VUJ6 765 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 GTF2IRD2BQ6EKJ0 949 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 CYP4F22Q6NT55 531 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 VHLLQ6RSH7 139 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 Q6ZSN1 163 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ZNF627Q7L945 461 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 HDGFL2Q7Z4V5 671 aaPredicted RBP1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ADGRE4PQ86SQ3 457 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 GTF2IRD2Q86UP8 949 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SYNE4Q8N205 404 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 TMEM87AQ8NBN3 555 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 OR6P1Q8NGX9 317 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 HAS1Q92839 578 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 CCDC140Q96MF4 163 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 DPYSL5Q9BPU6 564 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 TACO1Q9BSH4 297 aaKnown RBP1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PLA2G12BQ9BX93 195 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 NRDE2Q9H7Z3 1164 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 MSL2Q9HCI7 577 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PLA2G3Q9NZ20 509 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PPT2Q9UMR5 302 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 EMC9Q9Y3B6 208 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SLC30A1Q9Y6M5 507 aa1.96□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SLC27A2O14975 620 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ARHGAP6O43182 974 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 HMGCRP04035 888 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ZNF888P0CJ79 500 aaPredicted RBP1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ERCC3P19447 782 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 LTBRP36941 435 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ZNF143P52747 638 aaPredicted RBP1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PFKPQ01813 784 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SPIRE1Q08AE8 756 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 NOLC1Q14978 699 aaKnown RBP eCLIP1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PTPAQ15257 358 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SV2CQ496J9 727 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PAN2Q504Q3 1202 aaKnown RBP1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 EMC4Q5J8M3 183 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 FNDC7Q5VTL7 733 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 MBLAC2Q68D91 279 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 USP30Q70CQ3 517 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 TMPRSS6Q8IU80 811 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PPIL6Q8IXY8 311 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 DTX3Q8N9I9 347 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 MICAL1Q8TDZ2 1067 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 FRS2Q8WU20 508 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 TMEM176AQ96HP8 235 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SPATA32Q96LK8 384 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 KATNBL1Q9H079 304 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 NKX2-4Q9H2Z4 354 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ZNF703Q9H7S9 590 aaPredicted RBP1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SLC6A20Q9NP91 592 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 HSPBP1Q9NZL4 362 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 RBPJLQ9UBG7 517 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 FAM184BQ9ULE4 1060 aa1.95□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ZAR1LA6NP61 321 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 SUPT5HO00267 1087 aaKnown RBP1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 PPFIA4O75335 1185 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 GNAT1P11488 350 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 COL6A1P12109 1028 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 FAHP16930 419 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 ITGB6P18564 788 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 FBLP22087 321 aaKnown RBP1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 KCNQ1P51787 676 aa1.94□□□□□ -2.1
RNU6-1258P-201ENST00000516911 FOXL1Q12952 345 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms