RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 NEDD9Q14511 834 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MTF1Q14872 753 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SETDB1Q15047 1291 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PKN1Q16512 942 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 HLFQ16534 295 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MEA1Q16626 185 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EXOC3L4Q17RC7 722 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KNOP1Q1ED39 458 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TUSC1Q2TAM9 212 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EDRF1Q3B7T1 1238 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC38Q502W7 563 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SH3D19Q5HYK7 790 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM47AQ5JRC9 791 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM26FQ5R3K3 315 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM83BQ5T0W9 1011 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SWT1Q5T5J6 900 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 RC3H1Q5TC82 1133 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LGSNQ5TDP6 509 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEL1L2Q5TEA6 688 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 C6orf163Q5TEZ5 329 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MEI1Q5TIA1 1274 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 C12orf60Q5U649 245 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EMC10Q5UCC4 262 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 WDR78Q5VTH9 848 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SUSD4Q5VX71 490 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBC1D9BQ66K14 1250 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DENND2CQ68D51 928 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MSL1Q68DK7 614 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NCAPH2Q6IBW4 605 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPP1R18Q6NYC8 613 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PDXDC2PQ6P474 469 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC174Q6PII3 467 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 BTNL9Q6UXG8 535 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KDM7AQ6ZMT4 941 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARHGEF18Q6ZSZ5 1173 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SYDE1Q6ZW31 735 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DYMQ7RTS9 669 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF572Q7Z3I7 529 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KRT26Q7Z3Y9 468 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LRP10Q7Z4F1 713 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FBXO33Q7Z6M2 555 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PCGF5Q86SE9 256 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DAAM2Q86T65 1068 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CEP57Q86XR8 500 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBC1D10CQ8IV04 446 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM139Q8IV31 216 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 APLFQ8IW19 511 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZSCAN29Q8IWY8 852 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KLHL7Q8IXQ5 586 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PLPP6Q8IY26 295 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TEX11Q8IYF3 940 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SMYD4Q8IYR2 804 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GRAMD1CQ8IYS0 662 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANKRD35Q8N283 1001 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LCORLQ8N3X6 602 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MREGQ8N565 214 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SRBD1Q8N5C6 995 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MYCT1Q8N699 235 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC197Q8NCU1 140 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ACRBPQ8NEB7 543 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NEDD1Q8NHV4 660 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 RBM46Q8TBY0 533 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ACTRT1Q8TDG2 376 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 OXER1Q8TDS5 423 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SNX29Q8TEQ0 813 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHURC1Q8WUH1 139 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLC39A7Q92504 469 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CENPTQ96BT3 561 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NSUN4Q96CB9 384 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRIM11Q96F44 468 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM84BQ96KN1 310 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP6V1G3Q96LB4 118 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DRC1Q96MC2 740 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SCLT1Q96NL6 688 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANKRD27Q96NW4 1050 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NACC1Q96RE7 527 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCT8L2Q96SF2 557 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KRT12Q99456 494 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EYA3Q99504 573 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PLIN2Q99541 437 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LRRC1Q9BTT6 524 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 AMNQ9BXJ7 453 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM121BQ9BXQ6 578 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 IRX2Q9BZI1 471 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRIM9Q9C026 710 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 WNT8AQ9H1J5 351 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ISCUQ9H1K1 167 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 HSD3B7Q9H2F3 369 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DHX36Q9H2U1 1008 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM206Q9H813 350 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MRPL44Q9H9J2 332 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPCSQ9HAB8 311 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 VEZTQ9HBM0 779 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DCP1AQ9NPI6 582 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NLRC4Q9NPP4 1024 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPANQ9NQ55 473 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM207AQ9NSI2 230 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KLC4Q9NSK0 619 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GJB4Q9NTQ9 266 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms