RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 INPP4AQ96PE3 977 aaPredicted RBP8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 HSD17B14Q9BPX1 270 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 EXOC1Q9NV70 894 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 RGL1Q9NZL6 768 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 SYNRGQ9UMZ2 1314 aa8.53□□□□□ -1.04
SCARNA20.1-201ENST00000516009 PVALEFA0A1B0GWK0 134 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SOWAHBA6NEL2 793 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PPP1R3GB7ZBB8 358 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 DHX15O43143 795 aaKnown RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ATP9AO75110 1047 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SLITRK3O94933 977 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 EYA4O95677 639 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 FCER1AP12319 257 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 CD44P16070 742 aaKnown RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SFNP31947 248 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PPP1R2P41236 205 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 JAK3P52333 1124 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 KRT76Q01546 638 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 CTTNQ14247 550 aaKnown RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 NCAPHQ15003 741 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 KLHL10Q6JEL2 608 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 RGMBQ6NW40 437 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SARM1Q6SZW1 724 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SAPCD2Q86UD0 394 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SMYD4Q8IYR2 804 aaPredicted RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ANKRD13CQ8N6S4 541 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SYT2Q8N9I0 419 aaPredicted RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 GIMAP8Q8ND71 665 aaPredicted RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 RDM1Q8NG50 284 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ENOX1Q8TC92 643 aaKnown RBP8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 DDX12PQ92771 950 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 NACC1Q96RE7 527 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 TRIM5Q9C035 493 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 MORF4L1Q9UBU8 362 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ARID2Q68CP9 1835 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ASTN1O14525 1302 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 NFASCO94856 1347 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PASKQ96RG2 1323 aa8.52□□□□□ -1.05
SCARNA20.1-201ENST00000516009 DNAJC25-GNG10A0A024R161 153 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 LOC102724159A0A0B4J2E5 919 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PSMA7O14818 248 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 AP5Z1O43299 807 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PGK2P07205 417 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 P4HBP07237 508 aaKnown RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 IDEP14735 1019 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 KCNA2P16389 499 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 CYP11B2P19099 503 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 EDNRBP24530 442 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ICAM3P32942 547 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PRCPP42785 496 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 QARSP47897 775 aaKnown RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ZNF75DP51815 510 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SLC12A3P55017 1021 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PSMC6P62333 389 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PAK1Q13153 545 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PSMD2Q13200 908 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PWP2Q15269 919 aaKnown RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ZNF746Q6NUN9 644 aaPredicted RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 CCDC65Q8IXS2 484 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 TRMT44Q8IYL2 757 aaKnown RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 BANK1Q8NDB2 785 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SMC1BQ8NDV3 1235 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 DNAJC19Q96DA6 116 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 TRIM44Q96DX7 344 aaPredicted RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PTPN18Q99952 460 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 LXNQ9BS40 222 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PORCNQ9H237 461 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 BHMT2Q9H2M3 363 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 R3HDMLQ9H3Y0 253 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ZSWIM4Q9H7M6 989 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ZCCHC17Q9NP64 241 aaKnown RBP8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PANK4Q9NVE7 773 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 CTNND2Q9UQB3 1225 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 GDAQ9Y2T3 454 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 NFE2L3Q9Y4A8 694 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
SCARNA20.1-201ENST00000516009 KIF3CO14782 793 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 STRNO43815 780 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 DKC1O60832 514 aaKnown RBP eCLIP8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 RGS20O76081 388 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 CCNE2O96020 404 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PTMAP06454 111 aaKnown RBP8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SLC10A3P09131 477 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 STX17P56962 302 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 INHBEP58166 350 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 FSTL1Q12841 308 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 TPD52L1Q16890 204 aaPredicted RBP8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 FAM110CQ1W6H9 321 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SPATA1Q5VX52 437 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SEPT14Q6ZU15 432 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SMAP1Q8IYB5 467 aaPredicted RBP8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 ADSSL1Q8N142 457 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 PIGOQ8TEQ8 1089 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 NELFBQ8WX92 580 aa8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 DHTKD1Q96HY7 919 aaPredicted RBP8.5□□□□□ -1.05
SCARNA20.1-201ENST00000516009 SENP7Q9BQF6 1050 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms