RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 CFAP45Q9UL16 551 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 COL4A5P29400 1685 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
SFXN1-211ENST00000515736 GPR25O00155 361 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 SOX1O00570 391 aaPredicted RBP9.49□□□□□ -0.89
SFXN1-211ENST00000515736 ZNF213O14771 459 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 PPIP5K2O43314 1243 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 GUCY2CP25092 1073 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 CDK8P49336 464 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 LBX1P52954 281 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 AMPD3Q01432 767 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 UVSSAQ2YD98 709 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 TKFCQ3LXA3 575 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 SLC9C2Q5TAH2 1124 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 FOXR1Q6PIV2 292 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 STOX1Q6ZVD7 989 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 SPATC1Q76KD6 591 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 SPATA5Q8NB90 893 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 BRF1Q92994 677 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 ZNF669Q96BR6 464 aaPredicted RBP9.49□□□□□ -0.89
SFXN1-211ENST00000515736 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 PRDM10Q9NQV6 1147 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 BSDC1Q9NW68 430 aaPredicted RBP9.49□□□□□ -0.89
SFXN1-211ENST00000515736 FRRS1LQ9P0K9 344 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 KLHL42Q9P2K6 505 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 PFDN2Q9UHV9 154 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 ZMYM5Q9UJ78 669 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 ZNF804BA4D1E1 1349 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 SALL1Q9NSC2 1324 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 ECM29Q5VYK3 1845 aa9.49□□□□□ -0.89
SFXN1-211ENST00000515736 RASSF10A6NK89 507 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 H3BQV1 296 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 GFRA2O00451 464 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 CDKL5O76039 1030 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 FGAP02671 866 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
SFXN1-211ENST00000515736 PDE6AP16499 860 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 EPHA1P21709 976 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 CDC27P30260 824 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
SFXN1-211ENST00000515736 RCAN1P53805 252 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 GAS2L3Q86XJ1 694 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 ANKRD18AQ8IVF6 992 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 MB21D2Q8IYB1 491 aaPredicted RBP9.48□□□□□ -0.89
SFXN1-211ENST00000515736 NECAB1Q8N987 351 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
SFXN1-211ENST00000515736 TMEM40Q8WWA1 233 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 TRIM44Q96DX7 344 aaPredicted RBP9.48□□□□□ -0.89
SFXN1-211ENST00000515736 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 NACAP1Q9BZK3 213 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 ANKRD2Q9GZV1 360 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 TSPY26PQ9H489 355 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 SOX17Q9H6I2 414 aaPredicted RBP9.48□□□□□ -0.89
SFXN1-211ENST00000515736 DACH1Q9UI36 760 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 TAF1P21675 1872 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 NID2Q14112 1375 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 SNED1Q8TER0 1413 aa9.48□□□□□ -0.89
SFXN1-211ENST00000515736 MYH6P13533 1939 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 TCRBV5S4A2TA0A5A2 114 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 UPK3BL1B0FP48 263 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 UPK3BL2E5RIL1 263 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 HTR3BO95264 441 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 CAVIN2O95810 425 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 BMP4P12644 408 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 ADH7P40394 386 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 EPS15P42566 896 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 PHKA1P46020 1223 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 MASP1P48740 699 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 MAP2K1Q02750 393 aaPredicted RBP9.47□□□□□ -0.89
SFXN1-211ENST00000515736 SCRN1Q12765 414 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 AOC3Q16853 763 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 MRM1Q6IN84 353 aaKnown RBP9.47□□□□□ -0.89
SFXN1-211ENST00000515736 CPLX2Q6PUV4 134 aaKnown RBP9.47□□□□□ -0.89
SFXN1-211ENST00000515736 SLC51AQ86UW1 340 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 TAB3Q8N5C8 712 aaPredicted RBP9.47□□□□□ -0.89
SFXN1-211ENST00000515736 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 GPBAR1Q8TDU6 330 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 TTC9Q92623 222 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 KRT23Q9C075 422 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 PUS7LQ9H0K6 701 aaKnown RBP9.47□□□□□ -0.89
SFXN1-211ENST00000515736 DDX19AQ9NUU7 478 aaKnown RBP9.47□□□□□ -0.89
SFXN1-211ENST00000515736 KLF15Q9UIH9 416 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 CNPY2Q9Y2B0 182 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 TAF6LQ9Y6J9 622 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
SFXN1-211ENST00000515736 H3BRJ5 948 aa9.46□□□□□ -0.9
SFXN1-211ENST00000515736 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
SFXN1-211ENST00000515736 IDH1O75874 414 aaKnown RBP9.46□□□□□ -0.9
SFXN1-211ENST00000515736 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.9
SFXN1-211ENST00000515736 PDIA3P30101 505 aaKnown RBP9.46□□□□□ -0.9
SFXN1-211ENST00000515736 ECE1P42892 770 aa9.46□□□□□ -0.9
SFXN1-211ENST00000515736 CHRNDQ07001 517 aa9.46□□□□□ -0.9
SFXN1-211ENST00000515736 SSRP1Q08945 709 aaKnown RBP9.46□□□□□ -0.9
SFXN1-211ENST00000515736 PPP2R5BQ15173 497 aa9.46□□□□□ -0.9
SFXN1-211ENST00000515736 TCEA2Q15560 299 aa9.46□□□□□ -0.9
SFXN1-211ENST00000515736 CAVIN4Q5BKX8 364 aa9.46□□□□□ -0.9
SFXN1-211ENST00000515736 USP50Q70EL3 339 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms