RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 RIT2Q99578 217 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 TEKT3Q9BXF9 490 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 UBIAD1Q9Y5Z9 338 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 SNCAIPQ9Y6H5 919 aa17.17■□□□□ 0.34
THUMPD3-210ENST00000515662 MAP3K9P80192 1104 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 MRPS9P82933 396 aaKnown RBP17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 VGLL4Q14135 290 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 PANX2Q96RD6 677 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 TUBGCP2Q9BSJ2 902 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 FGFBP2Q9BYJ0 223 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 BHMT2Q9H2M3 363 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.16■□□□□ 0.348e-9■■□□□ 11.6
THUMPD3-210ENST00000515662 STX10O60499 249 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 GYPCP04921 128 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 TKFCQ3LXA3 575 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 SH3D19Q5HYK7 790 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 NYAP1Q6ZVC0 841 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 TPH2Q8IWU9 490 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 ZNF507Q8TCN5 953 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 TBC1D7Q9P0N9 293 aa17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
THUMPD3-210ENST00000515662 ARHGAP6O43182 974 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 MFAP3LO75121 409 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 PGM5Q15124 567 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 EPHA7Q15375 998 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 SNRNP48Q6IEG0 339 aaKnown RBP17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 NSMFQ6X4W1 530 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 CPLX3Q8WVH0 158 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 REEP2Q9BRK0 252 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 JADE2Q9NQC1 790 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 TNNT1P13805 278 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 MUTP22033 750 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 CASP14P31944 242 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 TMEM132BQ14DG7 1078 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 MYRIPQ8NFW9 859 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 PXMP2Q9NR77 195 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 WDR90Q96KV7 1748 aa17.15■□□□□ 0.34
THUMPD3-210ENST00000515662 PAPPA2Q9BXP8 1791 aa17.14■□□□□ 0.34
THUMPD3-210ENST00000515662 COL11A1P12107 1806 aaPredicted RBP17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 ATP2A1O14983 1001 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 FGFR1OPO95684 399 aaKnown RBP17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 MTIF2P46199 727 aaKnown RBP17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 FXR1P51114 621 aaKnown RBP eCLIP17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 TRIM14Q14142 442 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 LRRC55Q6ZSA7 311 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 TSG101Q99816 390 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 B4DLN1 442 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 DHX15O43143 795 aaKnown RBP17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 DNM2P50570 870 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 CNGA4Q8IV77 575 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 SCFD1Q8WVM8 642 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 PRIMPOLQ96LW4 560 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 PDCD2LQ9BRP1 358 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 ZHX3Q9H4I2 956 aa17.14■□□□□ 0.33
THUMPD3-210ENST00000515662 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 PPP1R12BO60237 982 aaPredicted RBP17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 TPM1P09493 284 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 ITGB3BPQ13352 177 aaPredicted RBP17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 MTMR1Q13613 665 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 MIIPQ5JXC2 388 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 RINT1Q6NUQ1 792 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 CCDC51Q96ER9 411 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 WRAP73Q9P2S5 460 aaPredicted RBP17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 NACC1Q96RE7 527 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 TEX13BQ9BXU2 312 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 CSADQ9Y600 493 aa17.13■□□□□ 0.33
THUMPD3-210ENST00000515662 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 RNF225M0QZC1 329 aaPredicted RBP17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 DDX39AO00148 427 aaKnown RBP17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 ZBTB39O15060 712 aa17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 NKRFO15226 690 aaKnown RBP eCLIP17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 CCP110O43303 1012 aa17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 KIF20AO95235 890 aa17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 MYCLP12524 364 aaPredicted RBP17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 SFR1Q86XK3 245 aa17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 NEK9Q8TD19 979 aa17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
THUMPD3-210ENST00000515662 RSPH10B2B2RC85 870 aa17.11■□□□□ 0.33
THUMPD3-210ENST00000515662 RSPH10BP0C881 870 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms