RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-231ENST00000515620 GNAT1P11488 350 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 HAND2P61296 217 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 TRIM50Q86XT4 487 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 IL31RAQ8NI17 732 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 GPKOWQ92917 476 aaPredicted RBP eCLIP12.23□□□□□ -0.45
CLDND1-231ENST00000515620 P2RX5Q93086 422 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-231ENST00000515620 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-231ENST00000515620 TTC14Q96N46 770 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 PCDHGC5Q9Y5F6 944 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 MYO15AQ9UKN7 3530 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 RIF1Q5UIP0 2472 aaKnown RBP12.22□□□□□ -0.45
CLDND1-231ENST00000515620 OPLAHO14841 1288 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 DGKIO75912 1065 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 CHRNA1P02708 482 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 HSD17B4P51659 736 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 RBM10P98175 930 aaKnown RBP12.22□□□□□ -0.45
CLDND1-231ENST00000515620 LPIN1Q14693 890 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 PGM5Q15124 567 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 ALX1Q15699 326 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 KLHL23Q8NBE8 558 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 SPPL3Q8TCT6 385 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 OTUD7AQ8TE49 926 aaPredicted RBP12.22□□□□□ -0.45
CLDND1-231ENST00000515620 POF1BQ8WVV4 589 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
CLDND1-231ENST00000515620 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
CLDND1-231ENST00000515620 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 ENPP3O14638 875 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 FGAP02671 866 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 TGFB3P10600 412 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.45
CLDND1-231ENST00000515620 SP100P23497 879 aaPredicted RBP12.21□□□□□ -0.45
CLDND1-231ENST00000515620 NBL1P41271 181 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 ID4P47928 161 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 NUBP1P53384 320 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 PAN2Q504Q3 1202 aaKnown RBP12.21□□□□□ -0.45
CLDND1-231ENST00000515620 NAALADL2Q58DX5 795 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 TBC1D10CQ8IV04 446 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 CMTR2Q8IYT2 770 aaKnown RBP12.21□□□□□ -0.45
CLDND1-231ENST00000515620 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 RIPOR3Q96MK2 946 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 TLE6Q9H808 572 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 EHMT1Q9H9B1 1298 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
CLDND1-231ENST00000515620 FAM186AA6NE01 2351 aa12.21□□□□□ -0.46
CLDND1-231ENST00000515620 NEDD4P46934 1319 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 PER2O15055 1255 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 CCND2P30279 289 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
CLDND1-231ENST00000515620 ADAM17P78536 824 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 ASPRV1Q53RT3 343 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
CLDND1-231ENST00000515620 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 VN1R2Q8NFZ6 395 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 LINC01599Q8WXQ3 324 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 SUSD6Q92537 303 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 USP26Q9BXU7 913 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 DCTPP1Q9H773 170 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 ZNF215Q9UL58 517 aaPredicted RBP12.2□□□□□ -0.46
CLDND1-231ENST00000515620 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
CLDND1-231ENST00000515620 PPFIA3O75145 1194 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 SP4Q02446 784 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 MGAT3Q09327 533 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 CYFIP1Q7L576 1253 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 TMEM105Q8N8V8 129 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 ESR2Q92731 530 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 NKD2Q969F2 451 aaPredicted RBP12.19□□□□□ -0.46
CLDND1-231ENST00000515620 GPR20Q99678 358 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 KAT14Q9H8E8 782 aa12.19□□□□□ -0.46
CLDND1-231ENST00000515620 ZMYM6O95789 1325 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 A0A0D9SFI3 127 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
CLDND1-231ENST00000515620 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
CLDND1-231ENST00000515620 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
CLDND1-231ENST00000515620 MX1P20591 662 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 GATMP50440 423 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 GHRHRQ02643 423 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 FBXO47Q5MNV8 452 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 TAF2Q6P1X5 1199 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 RSPH3Q86UC2 560 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 ADSSL1Q8N142 457 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms