RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 PSMC5P62195 406 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 FSTL1Q12841 308 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 PAK1Q13153 545 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 IRF5Q13568 498 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 CUL4BQ13620 913 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 IQCB1Q15051 598 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 HS1BP3Q53T59 392 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 FOXR2Q6PJQ5 311 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
TPM3-222ENST00000515609 SAPCD2Q86UD0 394 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 FAM114A1Q8IWE2 563 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 TPH2Q8IWU9 490 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 EXOC8Q8IYI6 725 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 MSL3Q8N5Y2 521 aaKnown RBP10.57□□□□□ -0.72
TPM3-222ENST00000515609 AOPEPQ8N6M6 819 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 FAM133AQ8N9E0 248 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
TPM3-222ENST00000515609 SLC17A8Q8NDX2 589 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 PPP1R9BQ96SB3 815 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 PLIN2Q99541 437 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 SEL1LQ9UBV2 794 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 RWDD2AQ9UIY3 292 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 DIS3Q9Y2L1 958 aaKnown RBP10.57□□□□□ -0.72
TPM3-222ENST00000515609 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 COL4A3BPQ9Y5P4 624 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
TPM3-222ENST00000515609 COL11A1P12107 1806 aaPredicted RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 ARHGEF35A5YM69 484 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 TMEM88BA6NKF7 163 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 FOXN1O15353 648 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 CHMP2AO43633 222 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 PTMAP06454 111 aaKnown RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 IDEP14735 1019 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 TAL1P17542 331 aaPredicted RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 SCP2P22307 547 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 EDNRBP24530 442 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 MCM6Q14566 821 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 FILIP1LQ4L180 1135 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 SPATA1Q5VX52 437 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 B3GNT9Q6UX72 402 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 C11orf57Q6ZUT1 292 aaPredicted RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 GPBP1Q86WP2 473 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 C4orf19Q8IY42 314 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 GRAMD1CQ8IYS0 662 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 DDX12PQ92771 950 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 TSG101Q99816 390 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 BLZF1Q9H2G9 400 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 UNC45AQ9H3U1 944 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 ZFYVE28Q9HCC9 887 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 JPH1Q9HDC5 661 aaPredicted RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 ANKEF1Q9NU02 776 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 BLOC1S4Q9NUP1 217 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 PANK4Q9NVE7 773 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 DBR1Q9UK59 544 aaKnown RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 ODF2LQ9ULJ1 636 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 ABT1Q9ULW3 272 aaKnown RBP10.56□□□□□ -0.72
TPM3-222ENST00000515609 PPME1Q9Y570 386 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
TPM3-222ENST00000515609 DNAJC25-GNG10A0A024R161 153 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 SLC15A5A6NIM6 579 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 NRDCO43847 1150 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 MED24O75448 989 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 CNMDO75829 334 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 SLITRK3O94933 977 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 ADCY5O95622 1261 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 SLC10A3P09131 477 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 SPATA31C1P0DKV0 1188 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 CYP2C8P10632 490 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 ALCAMQ13740 583 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 TAF1CQ15572 869 aaPredicted RBP10.55□□□□□ -0.72
TPM3-222ENST00000515609 KMT5BQ4FZB7 885 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 FAM160B1Q5W0V3 765 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 ISM2Q6H9L7 571 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 DPP9Q86TI2 863 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 RASAL3Q86YV0 1011 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 GUF1Q8N442 669 aaKnown RBP10.55□□□□□ -0.72
TPM3-222ENST00000515609 ANKRD13CQ8N6S4 541 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 IL31RAQ8NI17 732 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 STAMQ92783 540 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
TPM3-222ENST00000515609 MRFAP1L1Q96HT8 127 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 LXNQ9BS40 222 aa10.55□□□□□ -0.72
TPM3-222ENST00000515609 MAGEC2Q9UBF1 373 aaPredicted RBP10.55□□□□□ -0.72
TPM3-222ENST00000515609 DHX15O43143 795 aaKnown RBP10.54□□□□□ -0.72
TPM3-222ENST00000515609 SERPINC1P01008 464 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 HOXC6P09630 235 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 CDC25BP30305 580 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 SLC12A3P55017 1021 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 CYP4A11Q02928 519 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms