RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TNPO1Q92973 898 aaKnown RBP15.61■□□□□ 0.09
TCOF1-215ENST00000515516 PGBD1Q96JS3 809 aa15.61■□□□□ 0.09
TCOF1-215ENST00000515516 ANO3Q9BYT9 981 aa15.61■□□□□ 0.09
TCOF1-215ENST00000515516 AZI2Q9H6S1 392 aa15.61■□□□□ 0.09
TCOF1-215ENST00000515516 JPH1Q9HDC5 661 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-215ENST00000515516 EPB41L2O43491 1005 aaKnown RBP15.6■□□□□ 0.09
TCOF1-215ENST00000515516 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-215ENST00000515516 SCG2P13521 617 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 MARK3P27448 753 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 HOXC8P31273 242 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 PPFIA1Q13136 1202 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 CEP55Q53EZ4 464 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 TYW1BQ6NUM6 668 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 RSPH3Q86UC2 560 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 FBXL16Q8N461 479 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 SEPT8Q92599 483 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-215ENST00000515516 C6orf50Q9HD87 102 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 KCNH7Q9NS40 1196 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 SLC9A2Q9UBY0 812 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 TELO2Q9Y4R8 837 aa15.6■□□□□ 0.09
TCOF1-215ENST00000515516 GSTTP1A0A1W2PQM5 241 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 AMHP03971 560 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 CTSHP09668 335 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 GNA11P29992 359 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 ADGRE1Q14246 886 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 CCDC85BQ15834 202 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-215ENST00000515516 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 TRAF7Q6Q0C0 670 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 DBF4BQ8NFT6 615 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 LMBR1Q8WVP7 490 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 ARNTL2Q8WYA1 636 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 RAD9AQ99638 391 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 CERS4Q9HA82 394 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 TMEM260Q9NX78 707 aa15.59■□□□□ 0.09
TCOF1-215ENST00000515516 LAMA2P24043 3122 aaKnown RBP15.59■□□□□ 0.09
TCOF1-215ENST00000515516 COL6A3P12111 3177 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 PRPF3O43395 683 aaKnown RBP15.58■□□□□ 0.08
TCOF1-215ENST00000515516 SREBF1P36956 1147 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 DEFB103AP81534 67 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 MBTPS1Q14703 1052 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 TAF2Q6P1X5 1199 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 USP38Q8NB14 1042 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 CYP2W1Q8TAV3 490 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 BICD2Q8TD16 824 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
TCOF1-215ENST00000515516 AGO4Q9HCK5 861 aaKnown RBP15.58■□□□□ 0.08
TCOF1-215ENST00000515516 CYP46A1Q9Y6A2 500 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 NFASCO94856 1347 aa15.58■□□□□ 0.08
TCOF1-215ENST00000515516 ESYT2A0FGR8 921 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 RRN3P2A6NIE6 340 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 GJB5O95377 273 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 ARP10275 920 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 CLK2P49760 499 aaKnown RBP15.57■□□□□ 0.08
TCOF1-215ENST00000515516 TAP1Q03518 808 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 GRIK4Q16099 956 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 PLEKHG4Q58EX7 1191 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 FAM117BQ6P1L5 589 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 RUFY3Q7L099 469 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 NIPA1Q7RTP0 329 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 TMCO2Q7Z6W1 182 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-215ENST00000515516 MYOCDQ8IZQ8 938 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 CCDC148Q8NFR7 591 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 PHKBQ93100 1093 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 COL25A1Q9BXS0 654 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-215ENST00000515516 SLC26A6Q9BXS9 759 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 ZMYND12Q9H0C1 365 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 TUBE1Q9UJT0 475 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 TRPC6Q9Y210 931 aa15.57■□□□□ 0.08
TCOF1-215ENST00000515516 MEIS1O00470 390 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 RPLP2P05387 115 aaKnown RBP15.56■□□□□ 0.08
TCOF1-215ENST00000515516 ACTR2P61160 394 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 IGBP1P78318 339 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 CCT2P78371 535 aaKnown RBP15.56■□□□□ 0.08
TCOF1-215ENST00000515516 ADAM17P78536 824 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 TCTN1Q2MV58 587 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 PLA2G4DQ86XP0 818 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 TRIM22Q8IYM9 498 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 REXO1Q8N1G1 1221 aaKnown RBP15.56■□□□□ 0.08
TCOF1-215ENST00000515516 APBB2Q92870 758 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 RNF26Q9BY78 433 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-215ENST00000515516 AGXT2Q9BYV1 514 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 ZSWIM6Q9HCJ5 1215 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 PPP4R2Q9NY27 417 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 TCEAL9Q9UHQ7 104 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 INSL6Q9Y581 213 aa15.56■□□□□ 0.08
TCOF1-215ENST00000515516 NID2Q14112 1375 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 RFXAPO00287 272 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 CPLX1O14810 134 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 BACH1O14867 736 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 IFNAR1P17181 557 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 PDIA3P30101 505 aaKnown RBP15.55■□□□□ 0.08
TCOF1-215ENST00000515516 STAT5BP51692 787 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 SKIV2LQ15477 1246 aaKnown RBP15.55■□□□□ 0.08
TCOF1-215ENST00000515516 FAM26DQ5JW98 314 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 FAM160B1Q5W0V3 765 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 CPLX2Q6PUV4 134 aaKnown RBP15.55■□□□□ 0.08
TCOF1-215ENST00000515516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.55■□□□□ 0.08
TCOF1-215ENST00000515516 PLPPR4Q7Z2D5 763 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms